| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1424 |
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| Symbol | |
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| ID | 4258540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1652063 |
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| End bp | 1653442 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638122058 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_737480 |
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| Protein GI | 114046930 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.545985 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTGC CCAATTCAAT TCAAGACTAT AGCGTACTGA TCATCGACGA TGAGCCCCAT
ATAGGCACAG TGCTCGTGCA GCTTTTTGAG CTGGAAGGCA TTAAAGCCTT CGCCACTACC
GATCCCAAAG GGATAGCCAA ATTGCTCGAC AGGGACTGGG CGGGCGTGGT GATTTCCGAT
GTGAATATGC CGCAGCTCGA TGGCATCAGT TTGATGCAGC AAATTCGTCA GCAGGATCCC
GATTTACCCG TCGTACTACT CACCGGCTTT GGCGATATCG CCATGGCGGT CAATGCGTTA
AAACAAGGGG CCTACGATTT TCTCGAAAAA CCCTTTAACA ATGAACACAT GCTAGATGTG
GTGAAGCGCG CCTTAGATAA ACGTAGCCTC ACCTTAGAGA ACCGTAAATT AAAGAAAGAG
TTAGAAAGCC ATAACGTGCC AGGCCCAAGA ATATTAGGCC ACAGCGTCGG CATTTTGCGT
ATGCGTCACA TCATAGACCA AGTGATCGAC ACCCCTGCCG ATGTGCTTAT CGAAGGTGAA
ACCGGTACGG GTAAGGAATT GGTCGCCCGC TATCTGCACG ACCACAGCAG TCGCAATCAA
GCCAACTTTG TGGCGATTAA CTGCGGTGCG ATTCCCGAAA ACTTGATTGA AAGCGAGCTA
TTTGGCGCCG AAGCTGGTGC CTTTACCGGG GTCGATAAAC TGCGTGTCGG TAAGTTTGAA
TACGCCAATG GCGGCACACT CTTTTTAGAT GAAATCGAAA GTACGCCGCT GTCGTTACAG
GTCAAACTGC TGCGGGTGCT CGAAGATCGC AAGGTCGAAC GCCTAGGCTC CAATAAAAGC
ATTAATTTGG ATATTCGGGT AATTGCCGCC ACTAAGGTGG ATTTAAAGTC CCTGTGCGAC
ACCGGAGAGT TTCGCCAAGA CTTGCTCTAT CGCTTAAATC TGGTGACAGT GCCCATTCCA
CCACTCAGGG ATCGCCGCGA AGATATTCCC TTATTATTCT TACATTTTGC CCGTATGGCC
TCGGCGCGCT ATCACAAGGC CTTAATTGCC CTCAATGCCG AGCAGAATGC CATCCTCAGC
TCCCACGACT GGCCGGGTAA TGTGCGTGAG CTGCGAAATC TGGCCGAACG TTATGTGTTA
CTCGGTGGCG AAGCCGCCTT CGCAGGCACC TTAGGCAACG CGCCCAGTCT GCATACCAGT
ATGTCATTGC TGCAACGGGT CGAGTTTTTT GAGCGGGTAT TGATTGAAGA AGCCTTAAGC
CATAACAAGG GCAGCATTAA GCAGACAATG GAGCAACTCG AACTGCCCCG CAAAACCTTG
TACGACAAGA TGCGTAAATA CGATTTAGAC CGCAAGCAGT ATATCAACGC TGACGAGTAA
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| Protein sequence | MSLPNSIQDY SVLIIDDEPH IGTVLVQLFE LEGIKAFATT DPKGIAKLLD RDWAGVVISD
VNMPQLDGIS LMQQIRQQDP DLPVVLLTGF GDIAMAVNAL KQGAYDFLEK PFNNEHMLDV
VKRALDKRSL TLENRKLKKE LESHNVPGPR ILGHSVGILR MRHIIDQVID TPADVLIEGE
TGTGKELVAR YLHDHSSRNQ ANFVAINCGA IPENLIESEL FGAEAGAFTG VDKLRVGKFE
YANGGTLFLD EIESTPLSLQ VKLLRVLEDR KVERLGSNKS INLDIRVIAA TKVDLKSLCD
TGEFRQDLLY RLNLVTVPIP PLRDRREDIP LLFLHFARMA SARYHKALIA LNAEQNAILS
SHDWPGNVRE LRNLAERYVL LGGEAAFAGT LGNAPSLHTS MSLLQRVEFF ERVLIEEALS
HNKGSIKQTM EQLELPRKTL YDKMRKYDLD RKQYINADE
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