Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1411 |
Symbol | |
ID | 4258422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1631969 |
End bp | 1632598 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638122045 |
Product | hexapaptide repeat-containing transferase |
Protein accession | YP_737467 |
Protein GI | 114046917 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0665218 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACGC CAATCACAAC GGCCTTGCCT GATTATCAAA GCCAACATAA AAAGCGTCTA TCTTGGATGC CCTGGCTGTA TTTTTCGCTC AAAGAAAAAC ACTTAGTCTG GGCCAAACCT TGGCAGGATG AAGTGCAGGC CAACCTTTGC GCGCTCGAAA CCGTGACCAT TGGCGAAAAC TGTTTTATTG CGCCCGAAGC AAAGTTATTT GCTGAGCCCA ATCGCGATAT CACAATCGGT AATCGCTGCA TGATCGCGGC TGAATGCTTT TTGCACGGCC CTATCACGCT CGGTGATGAA GTCGCTATCA ATCACGGCTG CTCCTTCGAT GGTGGCCGAG TGGGCATTCA GATTGGCTCC CAAACCCGCA TTGCTAACCA TGTCACTATT TATGCGTTTA ATCATGGCAT GGCACCCGAT ACGCCCATTT ATCAACAAGC CTCAAACTCT AAAGGAGTCG TGATAGGTAA AGATGTGTGG ATTGGCGCAC AGGCAGGGAT AGTCGATGGT GTCACCATTG GCGACCATGC AGTGATCGGC ATGGGCTGTA TTGTCACTAA AGATGTTCCC GCATGGGCCA TCGTCGCGGG CAACCCCGCC CGGGTGATTG GCGATAGGCG GGATAAATAA
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Protein sequence | MQTPITTALP DYQSQHKKRL SWMPWLYFSL KEKHLVWAKP WQDEVQANLC ALETVTIGEN CFIAPEAKLF AEPNRDITIG NRCMIAAECF LHGPITLGDE VAINHGCSFD GGRVGIQIGS QTRIANHVTI YAFNHGMAPD TPIYQQASNS KGVVIGKDVW IGAQAGIVDG VTIGDHAVIG MGCIVTKDVP AWAIVAGNPA RVIGDRRDK
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