| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1409 |
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| Symbol | |
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| ID | 4258420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1628696 |
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| End bp | 1629820 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638122043 |
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| Product | patatin |
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| Protein accession | YP_737465 |
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| Protein GI | 114046915 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0748735 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCAACAT CAACAGCATT AGTTCTCGGT GGCGGTGGCG CTCGAGCCGC CTATCAAGTG
GGAGTGTTAA AAGCACTGGT CCAGCTTTAT CCGCGCAACC ATGGCGTGCC ATTCAAAATC
ATTTGTGGCA CCTCTGCGGG CGCGATTAAT GGCACCTCCA TTGCCACCCA CGCCTCCTGC
TTCCACTTAG GCGTCAAAAA ACTCGAATGG GTTTGGCGCC ATTTTGAAAC CAGAAAGGTA
TATCGCGCCT CCATCCCTGG CGTGTTAAGT CATTTAGCCA AGATGGCACT CAAAGGCCTA
CAGGATGATA AGGTGAATAC CGACGCTGGC AGCCTGCTCG ATAACGAGCC TTTACGGCAT
TTACTGAATG AACTCATCGA TTTTAAGAGA ATCGATCGCA ATATCCGCAA CGGCGCATTG
ACGGCGCTCA GTGTCGATAC CTCTTGCTAT AACAACTCGC GCTCGGTGAC GTTTTTTCAA
GCTTCGCGGG ATATTGAAAA CTGGACTCGC GCCAGACGCA GCGGTGAGCG GCGGATGTTA
AATACCGAAC ATCTTTTGGC AAGCTCCGCG ATTCCCATGG TGTTTCCGTC AATTAAACTT
AATCAAGCTT ATTATGGTGA CGGCTCAGTC CACCAGCTTG CGCCACTTTC AAGTCCAATT
CATTTGGGGG CTAATAAGCT ATTGGTGATA AACCTCGATA GTCCCCATAA GCATTTTCCG
ATGGAGCTAG AATATCATCC GAAGACAGCG ACCATTGCGG GTCATCTGCT AGATACTATC
TTTTCCGATA CCTTAAATAG CGATCTTGAG CGCCTAGAGC GGATTAACCA TACACTGTCG
CTTATTCCTG AAGAGAGCCG TGCTCAACTG TCATTACATC CCATACAGAC CCTAGTGATA
AAACCCAGTG AAGACTTAAG TAAAATCGCC GCCCGTTTCT ATGATGATAT GCCTTGGGCA
ATTAAGACTT TACTGGGCTT TATCGGTATC GACAGGCAGT CAGACTCGAG TATTGTGTCC
TATCTCTTGT TTGAGAAATC CTACACTAGT GCATTGATTG AATTGGGCTA TAAAGATGGC
ATGGCTCAAA TGGATGAGAT AAAAGCGTTT TTTAATTTGG CATGA
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| Protein sequence | MPTSTALVLG GGGARAAYQV GVLKALVQLY PRNHGVPFKI ICGTSAGAIN GTSIATHASC
FHLGVKKLEW VWRHFETRKV YRASIPGVLS HLAKMALKGL QDDKVNTDAG SLLDNEPLRH
LLNELIDFKR IDRNIRNGAL TALSVDTSCY NNSRSVTFFQ ASRDIENWTR ARRSGERRML
NTEHLLASSA IPMVFPSIKL NQAYYGDGSV HQLAPLSSPI HLGANKLLVI NLDSPHKHFP
MELEYHPKTA TIAGHLLDTI FSDTLNSDLE RLERINHTLS LIPEESRAQL SLHPIQTLVI
KPSEDLSKIA ARFYDDMPWA IKTLLGFIGI DRQSDSSIVS YLLFEKSYTS ALIELGYKDG
MAQMDEIKAF FNLA
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