Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1390 |
Symbol | |
ID | 4258559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1608429 |
End bp | 1608920 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638122024 |
Product | hexapaptide repeat-containing transferase |
Protein accession | YP_737446 |
Protein GI | 114046896 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0276639 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATGA ATAATTTTTT TCGTTTGCTA ATTAAATGGC TAGGTTTTTT CATTCCAGAC GGACCATATG GAGATAAATA CCGAGGAATG CTCTACAAAC CATTCTTAAA AAAATGTGGT GAAAATTTTA AAGTCGCAAG TCAAGCTTTT ATTTTTAATC CGAACGGATT GAGTGTTGGT AGTAATGTCT ATATTGGTTT TAATACATAT ATAGGTCAAG GAGTCATCAC TTTGGAGGAT GAGGTTTTGA TTGGCAATTG TGTATCTCTC ACGGCAAGTA ATCATACTAA AAAGGGCAGC TCTTATCGAT TTGGTGGGTA TGAAGCCAAA GACATTATAG TCAAGCGTGG TGCATGGCTC GCGGGTAATT GTTCAATTAT GGCAGGTGTT ACCATTGGGG AGGGGGCTCT TGTTGCTGCC GGAGCTGTTG TGACCAAAGA TGTCCCTGCG AATTTAACAG TAGGCGGAGT TCCTGCTAAG GTAATTAAAT GA
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Protein sequence | MKMNNFFRLL IKWLGFFIPD GPYGDKYRGM LYKPFLKKCG ENFKVASQAF IFNPNGLSVG SNVYIGFNTY IGQGVITLED EVLIGNCVSL TASNHTKKGS SYRFGGYEAK DIIVKRGAWL AGNCSIMAGV TIGEGALVAA GAVVTKDVPA NLTVGGVPAK VIK
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