Gene Shewmr7_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1390 
Symbol 
ID4258559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1608429 
End bp1608920 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content39% 
IMG OID638122024 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_737446 
Protein GI114046896 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0276639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATGA ATAATTTTTT TCGTTTGCTA ATTAAATGGC TAGGTTTTTT CATTCCAGAC 
GGACCATATG GAGATAAATA CCGAGGAATG CTCTACAAAC CATTCTTAAA AAAATGTGGT
GAAAATTTTA AAGTCGCAAG TCAAGCTTTT ATTTTTAATC CGAACGGATT GAGTGTTGGT
AGTAATGTCT ATATTGGTTT TAATACATAT ATAGGTCAAG GAGTCATCAC TTTGGAGGAT
GAGGTTTTGA TTGGCAATTG TGTATCTCTC ACGGCAAGTA ATCATACTAA AAAGGGCAGC
TCTTATCGAT TTGGTGGGTA TGAAGCCAAA GACATTATAG TCAAGCGTGG TGCATGGCTC
GCGGGTAATT GTTCAATTAT GGCAGGTGTT ACCATTGGGG AGGGGGCTCT TGTTGCTGCC
GGAGCTGTTG TGACCAAAGA TGTCCCTGCG AATTTAACAG TAGGCGGAGT TCCTGCTAAG
GTAATTAAAT GA
 
Protein sequence
MKMNNFFRLL IKWLGFFIPD GPYGDKYRGM LYKPFLKKCG ENFKVASQAF IFNPNGLSVG 
SNVYIGFNTY IGQGVITLED EVLIGNCVSL TASNHTKKGS SYRFGGYEAK DIIVKRGAWL
AGNCSIMAGV TIGEGALVAA GAVVTKDVPA NLTVGGVPAK VIK