| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1386 |
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| Symbol | |
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| ID | 4257279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1604416 |
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| End bp | 1605579 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638122020 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_737442 |
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| Protein GI | 114046892 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | [TIGR03588] UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00903713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGATTCCAT ACGGTAAACA AGATATCACC CAGCAGGACA TCGATGGTGT TGTTGCAGTG
TTGCAATCAG ACTTTTTAAC TCAGGGGCCT AAAGTACCAG AATTTGAAAA TTTACTTTCT
GCCTATACAG GAGCTACCCA CGCGTTAGCC GTAAATAGTG CCACTTCAGC GTTGCATATT
GCCTGCTTAG CGCTAGGTTT GGGTGAAAGA GATTGGTTAT GGACTAGTCC GATTACCTTT
GTCGCATCCG CCAATTGTGG TTTGTATTGC GGGGCTAAAG TCGATTTTGT GGATATTGAC
TCTGCAACGT ACAATATGTG TCCGAAGCAG CTAGAAAAAA AACTGATAGC GGCAAAGGCT
AATGGAAGGC TACCTAAAAT TGTAGTACCA GTTCACTTAT GTGGTCAGCC TTGCGATATG
CGAGAGATTG CTAAATTAGC TAAAGAGTAT GGTTTTAAAA TCATTGAAGA TGCTTCCCAT
GCTATCGGTG GACAATATCA CGGACAGCCA ATAGGTAATT GTGAATTTTC TGATATTACC
GTTTTTAGCT TCCATCCTGT CAAAATTATT ACAACTGCCG AAGGGGGAGC TGTTGTAACT
AATAATAAAG TATTAGCGGA TAAAATGGCC TTGCTACGTA GTCATGGAAT TACTCGTGAT
ACAGCGAAAA TGGAAAGTCC AAGTCATGGT AGTTGGTACT ATCAACAGAT AGATTTAGGT
TTTAATTACC GAATGACCGA AATACAAGCG GCATTAGGTG TGACTCAAAT GAAACGTTTG
GATCAGTTTG TTAAAACCCG TCACAGTTTG GCGGAGCGCT ATAACAAATT ATTAAAAATA
TTACCTGTTA TTTTACCTTA TCAACTAGAA AATACTTATT CTGGGCTTCA TCTTTACGTT
ATTCGCTTAA AGTTAGATGA AATTTCTCTT ACGCATCAAC AAGTGTTTGA TAGATTACGT
GAGAATGACA TCGGTGTTAA CCTCCACTAT ATTCCTGTCC ATACTCAGCC TTACTATCGA
AAAATGGGGT TTAATGATGG AGACTTTCCT GTAGCTGAAC AATATTATTG CGAAGCGATT
TCCTTACCTA TGTACCATTC TATGACTGAA GAACAGCAGG ATATTGTGGT TCGAGTGTTG
ACTGATATTT TAAAAGGCAA ATAG
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| Protein sequence | MIPYGKQDIT QQDIDGVVAV LQSDFLTQGP KVPEFENLLS AYTGATHALA VNSATSALHI
ACLALGLGER DWLWTSPITF VASANCGLYC GAKVDFVDID SATYNMCPKQ LEKKLIAAKA
NGRLPKIVVP VHLCGQPCDM REIAKLAKEY GFKIIEDASH AIGGQYHGQP IGNCEFSDIT
VFSFHPVKII TTAEGGAVVT NNKVLADKMA LLRSHGITRD TAKMESPSHG SWYYQQIDLG
FNYRMTEIQA ALGVTQMKRL DQFVKTRHSL AERYNKLLKI LPVILPYQLE NTYSGLHLYV
IRLKLDEISL THQQVFDRLR ENDIGVNLHY IPVHTQPYYR KMGFNDGDFP VAEQYYCEAI
SLPMYHSMTE EQQDIVVRVL TDILKGK
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