| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1361 |
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| Symbol | fliR |
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| ID | 4257726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1575638 |
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| End bp | 1576435 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638121995 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_737417 |
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| Protein GI | 114046867 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.837405 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGCTGC TGCTCGACAC CTTAATGCAA ACCATTGCCT CTTACATGTG GCCATTGTTT
CGCGTGACCA GCATGTTGAT GGTCATGGTG GTGTTTGGTG CTACGACAAC CCCGACTCGA
GTCCGTTTAC TCTTAGCGGT GGCGATCACT CTGGCCATAG CGCCAGTATT ACCGCCCGTT
AAGGATGCGG AGCTCTTTTC CTTAAGCGCT GTTTTTATTA CCGCTCAGCA AATTATTATT
GGTGTCGCCA TGGGCTTTGT AACCCAAATG GTGATGCAAA CCTTTGTGTT AACGGGCCAG
ATCATCGGTA TGCAAACCAG CTTAGGTTTT GCCTCTATGG TCGATCCGGG TTCTGGCCAA
CAAACGCCAG TGATAGGCAA CTTCTTTTTG TTGCTCGCGA CGTTGATTTT TCTCGCCGTC
GATGGACACC TGTTGATGAT CCGTATGTTA GTCGCCAGTT TCGAGACCTT ACCGATTTCG
AATCAAGGGT TAACGTTGAC GAGTTATCGC TCGCTAGCGG AATGGGGCTC CTACATGTTT
GGCGCGGCAC TGACCATGTC ACTCTCGGCG ATTATTGCCT TGCTACTCGT TAACTTATCC
TTCGGGGTAA TGACCCGCGC CGCACCGCAG CTGAACATTT TCTCGATAGG TTTCCCAATC
ACTATGATTG GTGGACTGCT CATTTTATGG TTAACCTTGA CCCCTGTAAT GGCCCATTTC
GAAGAGGTTT GGGCGTCGGC ACAGCTTTTG CTATGTGATA TTTTGGGGCT TCAGTGTCAA
GCCGACGGCA TACTTTAA
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| Protein sequence | MELLLDTLMQ TIASYMWPLF RVTSMLMVMV VFGATTTPTR VRLLLAVAIT LAIAPVLPPV
KDAELFSLSA VFITAQQIII GVAMGFVTQM VMQTFVLTGQ IIGMQTSLGF ASMVDPGSGQ
QTPVIGNFFL LLATLIFLAV DGHLLMIRML VASFETLPIS NQGLTLTSYR SLAEWGSYMF
GAALTMSLSA IIALLLVNLS FGVMTRAAPQ LNIFSIGFPI TMIGGLLILW LTLTPVMAHF
EEVWASAQLL LCDILGLQCQ ADGIL
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