Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1313 |
Symbol | |
ID | 4258062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1526712 |
End bp | 1528715 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638121946 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_737369 |
Protein GI | 114046819 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00146838 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTATA AAAATTGGCC TATTGCAAAA CAGATCGGTG CCCTCGCTTT TGTCCTTACC CTGATCATTT TCTGCATACT GAGTACCCTA TCCTATAAAT CCGCATCAAA CGTGCTCGAA GATAAAGGCA TCAGCGCCAT GAAAGCCGAG ATGCACGCTG TCTCCGATAT GCTGGAACTG CAATACGACA GCTTGCTGCA ACTGGCAAGA CGCAATGCCG ATGTTTTTAA GGAAATGTAC CCCGGCCAAT TTAGTCGTCC AGATAAAACC GTGAATGTGC TTGGAGTAAG CACCCCAGCG TTACTGCATG AAAAAGAACA AATTAACTCC TCAAAGAGTA AGGTGGATCG CTTTGCCAAC CTCACTGGCG GAACCGCGAC TGTGTTTGTA CGCGATGGGG ATGACTTTGT CCGGATTGCG ACCTCGTTAA AAAAAGCCGA TGGTAGCCGT GCCCTAGGTA CCTTCTTAGG TAAAACCCAT CCAGGCTATC CTACTCTTAT CAAAGGTGAG GTTTATGAAG GCTACGCCAA GCTCTTTGGC AAAGACTACA TGACAGTCTA CCGTCCGATT AAAGACACTC AAGGCCAAGT GATAGGGATC TTATACATAG GGTTTGAAAT CACTCAGTCC CTCACACAAT TACAAGCGGC GGTGAATAAA ATCATCCTAG AAGAAACCGG TAGTTTCTTG TTAATGCGCA AAGCCGACAA TGTACTAGTC GCAAACCCTC AATTTAATGC GGGTGAGCCT GTGACAGAGT CTATGCTCGA TGGATTAACC CTTAGCCAAG CCACACAGGA CCAAGCGGAA TGGCGCTACA CCAACGGTAA AAACCAACCT ATGTTTGCCT ACACCCAAAC GGTGAATGGG TGGAATTGGA TGTTGATTGG TCAAGTGAAT GCAAACGAAT TAAATGAAGA AAGCCTACTG CTACTAACCA TCAATGCCAT TGTAGCGGTC ACGGGTATTG TGCTTATTAC CGTACTGCTA TCCCTTGTGC TGATCCGCTC ACTCAAGCCT TTACATGCGC TGCAGCGCCA TATGGAAATC CTTGGCACGG GGGACTTTAG TCATCCGCTT CCACCATCGG CCTACGATAG TCAAAACGAG GTCGACAAGA TCACCACCAG CGTGTCGACC ATGTCATCTG AATTGCGACA ATTAATCAGT GCACTACAAG CCTCGGTGCA AAGCATTGAA CAGCAAGCCT CTAAGGCACA GCGGATTGCT AAGCAAAACG GTGAAGAAGC CCAGGCATTG ATGCAACAAA CGGATCAAAT CGCCACCGCG ATCGAAGAAA TGTCCACCTC CATCCGCGAT GTCGCCAACC ATGCTCAAGA TGGTGCGAAC CAGAGCCAAC AAGTGGATCT CGCCGCCAAA GAAGGCCAGC AGCAACAAAC CCAAGTGGTA CAGGATCTGT TGAAACTGAG CCAACAGCTC AGTAGTAGCC ATCAGGCCGT CGAAAAAGTC AGCCAAGAGA GTGAGGCCAT CAGTAAAGTC ACCGAGGTGA TTAACAGTAT TGCCGAACAA ACCAACCTGC TCGCACTCAA CGCGGCCATT GAAGCGGCCC GCGCAGGAGA ACAGGGCCGA GGCTTTGCCG TGGTCGCCGA TGAGGTGCGA ACCTTAGCCC AGCGGACACA ATCCTCCATT TTGGAAATTT CGCAAACCAT TGATAAGCTG CAATCTCAAG TGAAAACGAC CACCAGCCAA ATGGCGCAGA GCCACCAGCT GGGTATCGCC TCGGCTAATC AAGGGGAAGA AACCGGCAAG CAGCTGGAAG AAATCACCCG CAGAATTGGC GAACTGGCGA TTAGCTCACG CAATATTGCC TCGGCCACTG AGCAGCAGAG CAGCGTTGCC CAAGAGATCA CTCATAATCT GCATCAGATA AGCGAACTGG CTAATGAAGG TGAGCACAGA GCGGCCGAAA CAGTGAACTC GGCGAATGAT CTATCCTCCC TCGCTGTCGC GCTTAAACAG CAAATCAGTC AATTTAAAGC CTAA
|
Protein sequence | MNYKNWPIAK QIGALAFVLT LIIFCILSTL SYKSASNVLE DKGISAMKAE MHAVSDMLEL QYDSLLQLAR RNADVFKEMY PGQFSRPDKT VNVLGVSTPA LLHEKEQINS SKSKVDRFAN LTGGTATVFV RDGDDFVRIA TSLKKADGSR ALGTFLGKTH PGYPTLIKGE VYEGYAKLFG KDYMTVYRPI KDTQGQVIGI LYIGFEITQS LTQLQAAVNK IILEETGSFL LMRKADNVLV ANPQFNAGEP VTESMLDGLT LSQATQDQAE WRYTNGKNQP MFAYTQTVNG WNWMLIGQVN ANELNEESLL LLTINAIVAV TGIVLITVLL SLVLIRSLKP LHALQRHMEI LGTGDFSHPL PPSAYDSQNE VDKITTSVST MSSELRQLIS ALQASVQSIE QQASKAQRIA KQNGEEAQAL MQQTDQIATA IEEMSTSIRD VANHAQDGAN QSQQVDLAAK EGQQQQTQVV QDLLKLSQQL SSSHQAVEKV SQESEAISKV TEVINSIAEQ TNLLALNAAI EAARAGEQGR GFAVVADEVR TLAQRTQSSI LEISQTIDKL QSQVKTTTSQ MAQSHQLGIA SANQGEETGK QLEEITRRIG ELAISSRNIA SATEQQSSVA QEITHNLHQI SELANEGEHR AAETVNSAND LSSLAVALKQ QISQFKA
|
| |