| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1290 |
|---|
| Symbol | |
|---|
| ID | 4258022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 1494897 |
|---|
| End bp | 1495427 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638121923 |
|---|
| Product | acetyltransferase |
|---|
| Protein accession | YP_737346 |
|---|
| Protein GI | 114046796 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1246] N-acetylglutamate synthase and related acetyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0542587 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATAC GCTTATTTTC ACCTCCGGAC GTGGCACAGG TGGCGGCAGT ATTTAACGCC
AGTGTGATGG AGGGCGCGCA GGAATACTAT TCGCTTACCG AACGCTTAGC TTGGGCCCAA
AATCAGGGTG AGACACGCAG CGACGCCTAC TGGCTCGCAA AGTTAGAAGA CACCACCACT
TGGGTGGCAC AGGAAGGCAG CAAGTTGGTT GGCTTTACTA ACTTAAGGCT CTGCCCCGAT
GAAGAGCTCA ATTGTATGGT CGGCGAAGTC GATTGTCTGT TTGTCCACCC AGAATACAGC
CGTGCCGGGG TGGCGACGCA TTTGTATTTA GCCCTGCTCG AAGAGGCAAA AAGCCGTAAT
CTTAAACGGC TTACCGTTGA AGCCTCCTAT CAGGCGCGCC CTTTCTTTGA GAAACAGGGT
TTTAATTGCA TTCGCCGTAA TGAACTACGT CGCTATCTCA CCGCCGAAGA TAAACAAAAC
GACAGGGCGC AGGTGTTAGT GAACTTTAGT TTGATCATGT CATTATCCTA G
|
|---|
| Protein sequence | MQIRLFSPPD VAQVAAVFNA SVMEGAQEYY SLTERLAWAQ NQGETRSDAY WLAKLEDTTT
WVAQEGSKLV GFTNLRLCPD EELNCMVGEV DCLFVHPEYS RAGVATHLYL ALLEEAKSRN
LKRLTVEASY QARPFFEKQG FNCIRRNELR RYLTAEDKQN DRAQVLVNFS LIMSLS
|
|---|
| |