Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1289 |
Symbol | |
ID | 4258021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1494312 |
End bp | 1494833 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638121922 |
Product | acetyltransferase |
Protein accession | YP_737345 |
Protein GI | 114046795 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.057634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGCCG CCAATTCAAT CGAAAAGCTA GTCGAAGTCG TCCCCTATCA GCGCCGTTAT GCGCGTGCGG TGAGTGAACT CTTTCATCAG TGCGTGCGTC AAATACAACA TGAGCGTTAT AACGCCGCAC AGCTTAATGC TTGGTCGCAG GCACCCCGTT CGAGCCAGCA TTGGCATTTA CGTTTAAGTC GTTCCCAAGC ATGGATTATT TTGGTGACAG ATGCCGCGGG CTTATCTAAG ATTTGTGCAG GTTTTATCAA TGTCGAAACG GATTTTCACC ATAGAGGATA TATAGATAGC CTCTATATTC ATCCCGATTG GCAGCGGCAA GGGCTTGGGG AGCGAGCTTA TCGACAGCTA GAACTGTGGG CGAGGGAGCA GGGGTATAGT CAATTGAGTG CCGATGCGTC TTATCTTTCC CGCGGGCTGT TTATTAAGCT CGGATTTGTC CAACAGCAGC GCAGCTATCA ACAAAAACTG GGCCAGGTGT TACCGAGTTT TTATATGACT AAAAAACTGT AA
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Protein sequence | MSAANSIEKL VEVVPYQRRY ARAVSELFHQ CVRQIQHERY NAAQLNAWSQ APRSSQHWHL RLSRSQAWII LVTDAAGLSK ICAGFINVET DFHHRGYIDS LYIHPDWQRQ GLGERAYRQL ELWAREQGYS QLSADASYLS RGLFIKLGFV QQQRSYQQKL GQVLPSFYMT KKL
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