Gene Shewmr7_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1289 
Symbol 
ID4258021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1494312 
End bp1494833 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content49% 
IMG OID638121922 
Productacetyltransferase 
Protein accessionYP_737345 
Protein GI114046795 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.057634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGCCG CCAATTCAAT CGAAAAGCTA GTCGAAGTCG TCCCCTATCA GCGCCGTTAT 
GCGCGTGCGG TGAGTGAACT CTTTCATCAG TGCGTGCGTC AAATACAACA TGAGCGTTAT
AACGCCGCAC AGCTTAATGC TTGGTCGCAG GCACCCCGTT CGAGCCAGCA TTGGCATTTA
CGTTTAAGTC GTTCCCAAGC ATGGATTATT TTGGTGACAG ATGCCGCGGG CTTATCTAAG
ATTTGTGCAG GTTTTATCAA TGTCGAAACG GATTTTCACC ATAGAGGATA TATAGATAGC
CTCTATATTC ATCCCGATTG GCAGCGGCAA GGGCTTGGGG AGCGAGCTTA TCGACAGCTA
GAACTGTGGG CGAGGGAGCA GGGGTATAGT CAATTGAGTG CCGATGCGTC TTATCTTTCC
CGCGGGCTGT TTATTAAGCT CGGATTTGTC CAACAGCAGC GCAGCTATCA ACAAAAACTG
GGCCAGGTGT TACCGAGTTT TTATATGACT AAAAAACTGT AA
 
Protein sequence
MSAANSIEKL VEVVPYQRRY ARAVSELFHQ CVRQIQHERY NAAQLNAWSQ APRSSQHWHL 
RLSRSQAWII LVTDAAGLSK ICAGFINVET DFHHRGYIDS LYIHPDWQRQ GLGERAYRQL
ELWAREQGYS QLSADASYLS RGLFIKLGFV QQQRSYQQKL GQVLPSFYMT KKL