Gene Shewmr7_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1249 
Symbol 
ID4258174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1458856 
End bp1459431 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content45% 
IMG OID638121882 
Producthypothetical protein 
Protein accessionYP_737305 
Protein GI114046755 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00199018 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.506862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC AACTATTAGC TGCTTTGATT GGTGGGTTTT TACTGGCTCC AATGGCTGCA 
TCTGCCGCCG ATTATGTAAT TGACCGCGAA GGTGCTCATG CATCTATTAC CTTTAAAGTA
AGTCACTTAG GTTATAGCTA TGTCGTAGGT CGTTTTAACG ATTTCAGCGG TGATTTTAGC
TACGACGCTA AAAATCCAAC GGCAGCTAAA GTGAATGTTA AAGTGAACAC TTTAAGCGTT
GACTCTAACC ATGCCGAGCG TGATAAGCAT ATCCGTAGTG GCGACTTTTT AAATACGGCT
AAATTTGCTG AAGCGACTTT CGTTTCGACC TCGGTTGAAG ACAAAGGCAA TGGCGATATG
GTTATTACAG GTAACTTCAC GCTAAACGGT GTGACTAAAC CGTTGGCAAT CCAAGCGCAT
GCTGTGGGTG AGGGTCAAGA TCCTTGGGGC GGATACCGTG CAGGTTTTAC CGGTACTACC
ACGTTTGCGA TGAAAGATTA CGGCATCAAG ATGGACTTAG GCCCAGCGTC TGCCAATGTT
GAGTTAGATT TAGTGGTAGA AGGCGTGCGT AAGTAA
 
Protein sequence
MKKQLLAALI GGFLLAPMAA SAADYVIDRE GAHASITFKV SHLGYSYVVG RFNDFSGDFS 
YDAKNPTAAK VNVKVNTLSV DSNHAERDKH IRSGDFLNTA KFAEATFVST SVEDKGNGDM
VITGNFTLNG VTKPLAIQAH AVGEGQDPWG GYRAGFTGTT TFAMKDYGIK MDLGPASANV
ELDLVVEGVR K