Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1249 |
Symbol | |
ID | 4258174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1458856 |
End bp | 1459431 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638121882 |
Product | hypothetical protein |
Protein accession | YP_737305 |
Protein GI | 114046755 |
COG category | [S] Function unknown |
COG ID | [COG2353] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00199018 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.506862 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC AACTATTAGC TGCTTTGATT GGTGGGTTTT TACTGGCTCC AATGGCTGCA TCTGCCGCCG ATTATGTAAT TGACCGCGAA GGTGCTCATG CATCTATTAC CTTTAAAGTA AGTCACTTAG GTTATAGCTA TGTCGTAGGT CGTTTTAACG ATTTCAGCGG TGATTTTAGC TACGACGCTA AAAATCCAAC GGCAGCTAAA GTGAATGTTA AAGTGAACAC TTTAAGCGTT GACTCTAACC ATGCCGAGCG TGATAAGCAT ATCCGTAGTG GCGACTTTTT AAATACGGCT AAATTTGCTG AAGCGACTTT CGTTTCGACC TCGGTTGAAG ACAAAGGCAA TGGCGATATG GTTATTACAG GTAACTTCAC GCTAAACGGT GTGACTAAAC CGTTGGCAAT CCAAGCGCAT GCTGTGGGTG AGGGTCAAGA TCCTTGGGGC GGATACCGTG CAGGTTTTAC CGGTACTACC ACGTTTGCGA TGAAAGATTA CGGCATCAAG ATGGACTTAG GCCCAGCGTC TGCCAATGTT GAGTTAGATT TAGTGGTAGA AGGCGTGCGT AAGTAA
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Protein sequence | MKKQLLAALI GGFLLAPMAA SAADYVIDRE GAHASITFKV SHLGYSYVVG RFNDFSGDFS YDAKNPTAAK VNVKVNTLSV DSNHAERDKH IRSGDFLNTA KFAEATFVST SVEDKGNGDM VITGNFTLNG VTKPLAIQAH AVGEGQDPWG GYRAGFTGTT TFAMKDYGIK MDLGPASANV ELDLVVEGVR K
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