Gene Shewmr7_1226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1226 
Symbol 
ID4258257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1434106 
End bp1435677 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content50% 
IMG OID638121855 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_737282 
Protein GI114046732 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTAC AACATAAAGT CGCAATTGTG CTCAGCTTCG TTTTAGTCGT ACTCAGTAGC 
CTTCTTCTCA ACGCGATAGC ACTGTCTGGT CTCACGCAGG CGCTGATCTT GGGGGGAATT
GTCTGTGCTT GGGTGCTGTG GATAGTGCAG CGCTTAGTAA GCCATTACAC GCCCAAATCT
GAGCAAGTAA CGAAGGCATT CAAATCAGTT AACTCGCCAG AGCATGAGAT CAGCGTACAA
ACCAGTAAGA TTGCGATTGG CTCGGCCGAG GTGTCGCATT TTATTGACCT ATTAAATAAA
TCCATCGAGT CCAATGGCGA ACATGCCAGT GCTATTGCGG TGGCGGCGTC ACAGTTAAGC
CATACCACGG CGCTGTTAGG TGACAATGCC ACGCATATTT TAGGGCAAAC TCAAGAGGCG
GAGCGTTTAA GTGTGCAGGG GCGTACCCAA GCACAAAAGG GCGTATCGGC GATTGAATCC
CTCAGTGGCG ACATCAATAC CGCCGCACAG CAGGTGCAAG CACTAAAATC TAAAGCCGAA
CAAATTCAAA AGATTACCGA GGTGATTAAC TCGGTTGCCG AGCAAACGAA TTTACTGGCT
CTCAATGCCG CCATTGAGGC CGCTCGGGCA GGCGAGCAGG GGCGTGGCTT TGCCGTGGTT
GCAGATGAGG TTCGCAGCCT TGCGGGAAAA ACGGCAGGTG CGACCAAAGA TATTGGTAAG
ATGTTGCTCG AAATCCGCGC CGAAACTGAT AAAACCTCGG GGCTGATGGA GCGGGTAGTC
TCCCAAACCG CCGATGTGGT GATGGCAATG GGCACACTCG ATGGCCACTT TACCGACATT
TCGACATCCG TTACTCATTC GGCGCGGGCT CTAGGTGATA TGGAAGATTC ACTCAAACAA
TATAACCACA CCACCAACGA GATAAGCGGT TCGGTGAGCC AGATCCGCGA CTCCCTTAAC
GTCACTGGCA AGCAAAGCCA CAAACTCTCG GAGCAGGCGT TTACCCTGTC TTTAACCACT
GAGGGTATTT TCAGAGCCCT AGCGAATTGG GATACCCATA CCTTTGACCA GCAAGTGTTA
TTACTCGCCA ATGAAGCGGC TAAAGCCTGT GGCGAAAAAC TCTCCCAGGG ATTAGCTAAT
CGTAGTTTTA CCGAGACTGA ATTGTTTAAT CCGCAATATC AACCAATTGC GAATACTCAG
CCACAAAAGT ACAGCACGGC CTTTGACCGC TATACCGATC AACATTTTCC AGCCATTCAA
GAGCCCATTC TCGCCAAGCA CAATGAGATT GTTTATGCCG GCGCCGTGGA TAGAAAAGGC
TATTTCCCCA CACATAACAA GCGCTTTAGC CAAGCTTTAA CCGGCAAGGT GGAAGTCGAT
ATGGTGCATA ATCGCACTAA GCGCTTGTTT AACGATCCAA CCGGGATCCG CTGCGGCGCC
CATACGGAAC CTGTACTACT GCAAACCTAC AAGCGGGATA CCGGGGAAGT AATGCACGAT
TTGTCTGTTC CCATTTATGT GAATGGCAAA CATTGGGGCG GCTTTAGGGT AGGTTTTAAG
GCGAAATCTT AA
 
Protein sequence
MELQHKVAIV LSFVLVVLSS LLLNAIALSG LTQALILGGI VCAWVLWIVQ RLVSHYTPKS 
EQVTKAFKSV NSPEHEISVQ TSKIAIGSAE VSHFIDLLNK SIESNGEHAS AIAVAASQLS
HTTALLGDNA THILGQTQEA ERLSVQGRTQ AQKGVSAIES LSGDINTAAQ QVQALKSKAE
QIQKITEVIN SVAEQTNLLA LNAAIEAARA GEQGRGFAVV ADEVRSLAGK TAGATKDIGK
MLLEIRAETD KTSGLMERVV SQTADVVMAM GTLDGHFTDI STSVTHSARA LGDMEDSLKQ
YNHTTNEISG SVSQIRDSLN VTGKQSHKLS EQAFTLSLTT EGIFRALANW DTHTFDQQVL
LLANEAAKAC GEKLSQGLAN RSFTETELFN PQYQPIANTQ PQKYSTAFDR YTDQHFPAIQ
EPILAKHNEI VYAGAVDRKG YFPTHNKRFS QALTGKVEVD MVHNRTKRLF NDPTGIRCGA
HTEPVLLQTY KRDTGEVMHD LSVPIYVNGK HWGGFRVGFK AKS