| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1218 |
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| Symbol | |
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| ID | 4258249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1425407 |
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| End bp | 1427089 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638121847 |
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| Product | PepSY-associated TM helix domain-containing protein |
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| Protein accession | YP_737274 |
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| Protein GI | 114046724 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAAA CTTTTTTTAG AACCCTCTCC TGGCTGCACA CTTGGGCGGG TTTGCTCGTG
TGCTGGGTAT TACTGCTGAT CTTTTTTGCT GGTAGCCTGA GTTATTTCCG CCATGAAATG
AGCCTGTGGG CCGAGCCAGA GCTTCACCGC GGCGCCTTTC AAGACTATCA AACGAATCAA
GTAGCGAGTC AGCTTGACCA AGGTCAAGAC TACATTGAAG CGCATTCCGC TGCGGCAACC
CAACGCTGGT TAATCAATTT CCCAACCGAT AGAAGCCCCA TGCTGAGCTT TGCGTGGCAA
CTGCCGCCTG AAAAGGGTCA ACGCCGTGGC AAAATCGAGC AGCATGTCAC CAAGGCCGAT
GGCAGTGGCA TGATCACCGA TGTCCGCGAT AGCCGCGGCG GTGACTTCTT CTACCGTTTA
CATTTCGACC TGCACTACAT GCCAGCCATT ACGGCGCGCT ATATTGTGGG TGTTTGCACT
ATGTTTATGT TGATTGCCCT TATCAGCGGC ATTGTTATCC ATAAACGTAT CTTTAAAGAC
TTGTTTAGCT TTCGTCAGAA CAAGGGCGCT CGCTCTTGGT TAGATGCCCA TAATGTTAGC
TCTGTGATTG CCCTGCCCTA CCATTTGATG ATCACCTATA CCGGCCTTAT CACCTTAATG
CTGATCTATA TCCCATGGAC GGTAAGCACG GCTTATCCTG AGGATAATCA AGCCTTTTTA
AAAGAACTCA ATCCGGCGAG ACAAACAGAA AAAGCCTCGG GTATTCAAGC GGAGCAAGTG
CGCTTAAGCC AACTGCTGCC GCAAGTTCAG GCAGAATGGG GCGATGCACC TATCAAGCAG
GTGATGGTTT CCTATCCGAA AGATCAAAAT AGCCAAGTGA CCTTCTACCA AAATACCGGT
AAAGACGTCA CCGATGAATC AACACTCCTA GTGTTTAACG GTGTCACGGG TGAACTCAAG
TACGCCAGCC CCCATGAGAT GTCGGCAACC GTCGCGACCT ACGACACTAT GATGTCACTG
CACACCGCGC GTTTTGCCGC GCCACTGCTG CGTATTTTGT TCTTCTTCTG CGGCTTACTC
GGCTGCGCCA TGGTCGCAAC GGGCACCTTA ATGTGGGCGA TTCGTCTGCG CCAGAAACAG
CAAAAGGCTA TCGATAAAGG CGAGAAAGCG AGCAGTGGTC TGCGCTTAGT CGAAGGATTA
AACTTCATGT TTATCTTAGG CTTGCCCTTG GGCGCAGCAG CATTTTTCTA TGCCAACCGC
CTGCTACCAA CGGATTTTGC CGCCCGCTCA GCCTGGGAAG TACATAGCTT CTTTATCGCT
TTAGGAGTGA TGGGTGTATG GGCATTTTTC GGTCGAAGCC GACGTCACTG GCAATTCGCC
TTGATGCTTA TCGGAGCGCT TTATTGCGCA CTGCCGCTGT TAAATGCGGC CACGTCTCCG
AGCCACTTAA TTGATAATAT CCGCAGCCAA CAATGGGCAC TGGTTGGGTT TGATGTGCTC
GCGCTGTTAC TGGGTTGTGC CATGCTTTTT GCGAGCACTC GACTCTCGGC CGTGGTGAAA
ACACTGCAAA AGCCGAGTCG AAAAAATACC ACAGCCGTTG AAAAAGTCAG GAGAAAGCAA
CCTGAACCGA GTTATGCTAA CGAACTTGCC TCGTCGTCTC CCTTGGAGGA AGCAAAATCA
TGA
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| Protein sequence | MKETFFRTLS WLHTWAGLLV CWVLLLIFFA GSLSYFRHEM SLWAEPELHR GAFQDYQTNQ
VASQLDQGQD YIEAHSAAAT QRWLINFPTD RSPMLSFAWQ LPPEKGQRRG KIEQHVTKAD
GSGMITDVRD SRGGDFFYRL HFDLHYMPAI TARYIVGVCT MFMLIALISG IVIHKRIFKD
LFSFRQNKGA RSWLDAHNVS SVIALPYHLM ITYTGLITLM LIYIPWTVST AYPEDNQAFL
KELNPARQTE KASGIQAEQV RLSQLLPQVQ AEWGDAPIKQ VMVSYPKDQN SQVTFYQNTG
KDVTDESTLL VFNGVTGELK YASPHEMSAT VATYDTMMSL HTARFAAPLL RILFFFCGLL
GCAMVATGTL MWAIRLRQKQ QKAIDKGEKA SSGLRLVEGL NFMFILGLPL GAAAFFYANR
LLPTDFAARS AWEVHSFFIA LGVMGVWAFF GRSRRHWQFA LMLIGALYCA LPLLNAATSP
SHLIDNIRSQ QWALVGFDVL ALLLGCAMLF ASTRLSAVVK TLQKPSRKNT TAVEKVRRKQ
PEPSYANELA SSSPLEEAKS
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