Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1203 |
Symbol | |
ID | 4256453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1409773 |
End bp | 1410129 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638121832 |
Product | sigma 54 modulation protein / SSU ribosomal protein S30P |
Protein accession | YP_737259 |
Protein GI | 114046709 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000410866 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTAAAGA TTACGAGCAA ACAACTAGAA GTCACTGCCC CAATCCGTGA ACGCATTGAA AGCCGTTTTG ACAAACTTTC TAGGCACGAT GTGCAGTTGA TTAATCCCCA TGTCATCATC ACAGAGGAGA AACCTGGTTT CAAAATTGAA GCATCGGTTG GTATCCCAAA TGGAGAACTT TTTGCTCAAG CAAAACACGA CAATCTTTAT GCAGCCATTA CGGCCATGGG TCAAAAATTA GAGAAACAAC TCAATCGATT AACCCATAAA CCTGAAGCAC AACGTTTCGC ATCGATTGCT CATCCCGAAG ACGCTGTTAA TGTCGAGGAT GATTACGAAG AGGAAGATGC AGCTTAA
|
Protein sequence | MLKITSKQLE VTAPIRERIE SRFDKLSRHD VQLINPHVII TEEKPGFKIE ASVGIPNGEL FAQAKHDNLY AAITAMGQKL EKQLNRLTHK PEAQRFASIA HPEDAVNVED DYEEEDAA
|
| |