Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1149 |
Symbol | |
ID | 4257794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1334180 |
End bp | 1337335 |
Gene Length | 3156 bp |
Protein Length | 1051 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638121770 |
Product | acriflavin resistance protein |
Protein accession | YP_737205 |
Protein GI | 114046655 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.460529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.362909 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGCTGT CAGATGTTTC AGTTAAACGC CCCGTCGTCG CGATCGTTTT AAGCTTATTG CTGTGCGTCT TTGGTTTAGT GTCCTTCACT AAACTGTCGG TGCGGGAAAT GCCCGATGTC GAAAGCCCAG TGGTGACCGT CAGTACCAGC TACTCAGGCG CCTCGGCCGC CATTATGGAG AGCCAAATCA CTAAGACCCT CGAAGATGAA CTCACGGGGA TCAGCGGCAT CGATGAAATC ACCTCAACCA CCCGTAATGG TAGCTCGCGG ATCACAGTGA AATTCCTCCT CGGTTGGAAC TTAACCGAAG GCGTGAGTGA TGTGCGTGAC GCCGTGGCCC GCGCCCAGCG CCGCCTGCCT GAAGATGCCA ACGATCCTGT GGTCTCTAAG GACAATGGCT CCGGCGAGCC CTCTGTCTAT GTCAACTTAA GCTCAAGCGT AATGGACAGA ACCCAGCTGA CCGATTACGC CCAGCGCGTA TTAGAAGACA GATTTAGCCT CATCAGCGGC GTGAGCTCCA TCAGCATCTC GGGCGGTCTG TACAAGGTGA TGTACGTTAA GCTCAGACCC GAGCAAATGG CGGGACGCAA TGTCACAGTC ACCGACATTA CTAACGCACT GCGCAAAGAA AACGTCGAAA CCCCGGGCGG TCAAGTACGT AACGATACCA CTGTGATGTC GGTGCGCACC AAGAGACTCT ATTACACCCC GAAGGATTTT GACTATTTAG TGGTTCGTAC CGCCAGCGAT GGCACGCCTA TCTATCTGAA GGATGTGGCG GATGTAGCCG TTGGCGCCCA GAACGAAAAC TCCACTTTTA AGAGTGATGG TATTGTTAAC CTAAGCTTAG GTGTCATCAC TCAGTCCGAT GCTAACCCTT TGATTGTGGC GCAGGAAGTC CATAAAGAAG TCGATAGAAT TCAAGACTTT CTCCCCGAAG GCACAAGCCT AGTGGTGGAC TTTGACTCGA CCGTCTTTAT CGACCGCTCA ATTAACGAGG TGTACAACAC TCTCTATGTC ACTGGCGCCC TTGTGGTATT AGTGCTGTAC ATTTTTATCG GTCAAGCCAG AGCGACCCTC ATCCCCGCGG TGACTGTACC CGTGTCGCTG ATCTCGGCCT TTATCGCCGC CAATATGTTT GGCTACTCGA TTAACCTATT GACTCTGATG GCATTAATTC TCGCCATCGG TCTGGTCGTT GACGATGCCA TCGTCGTGGT AGAGAACATC TTCCACCATA TTGAGCGCGG TGAAGAGCCA CTACTTGCCG CTTACAAAGG TACGCGGGAA GTAGGCTTTG CAGTTGTGGC CACCACCGCC GTGTTAGTCA TGGTGTTCCT GCCGATTTCC TTTATGGAGG GCATGGTCGG TTTACTCTTC ACCGAATTCT CCGTGATGCT GGCAGTATCC GTGCTGTTTT CTTCACTTAT CGCCCTCACG CTGACGCCGG TACTGAGTAG CAAACTGCTC AAAGCTAATG TTAAACCGAA CCGCTTCAAT CGTTTCGTCG ACAGCGGTTT TGCCCGCATG GAAAAGGTTT ACCGTGTTGG CGTAACCCAT GCCATTCGTT TCAGATTACT CGCGCCCCTG GTGATCCTCG CCTGCGTTGG CGGCAGTGTA TGGTTAATGC AACAGGTGCC CTCACAGTTA GCGCCACAGG AAGACCGTGG CGTACTATTC GCCTTCGTCA AAGGCGCCGA AGGCACTAGT TATAATCGTA TGACGGCGAA CATGGACATA GTCGAAGACC GACTGATGCC CCTGCTCGGC CAAGGCGTGT TACGTTCTTT TAGCGTTCAA GCCCCCGCCT TCGGTGGCCG CGCTGGCGAT CAAACCGGCT TTGTGATCAT GCAGTTAGAG GACTGGGAAC ATCGTCATGT GACGGCGCAG CAGGCTCTGG GCATTATCAG CAACGCCCTA AAAGACATTC CCGATGTGAT GGTTCGCCCT ATGATGCCAG GCTTTAGAGG CCAATCGAGT GAACCAGTAC AATTCGTCCT CGGCGGCTCA GATTACGCCG AACTCTTTAA ATGGGCGCAG GTATTAAAAG AAGAAGCCAA TGCCAGTCCT ATGATGGAAG GCGCGGATTT AGACTATGCC GAAACCACGC CAGAGCTTAT TGTCACCGTC GATAAAGAAC GGGCGGCGGA GCTTGGGATC AGCGTCGATG AAGTCTCGCA AACCTTAGAA GTGATGCTCG GAGGGCGTAA AGAAACCACC TATGTCGACC GAGGCGAAGA GTACGATGTG TATCTGCGCG GCGACGAAAA TAGCTTTAAC AACGTAGGTG ATTTGAGCCA AATCTATATG CGCTCGGCCA AGGGCGAATT GGTGACGCTA GATACGGTAA CCCATATCGA AGAAGTGGCC TCGGCACAAA AACTCAGCCA TACCAATAAG CAAAAATCCA TCACCCTCAA GGCCAACATC AGTAAAGGCT ACACTTTGGG CGAAGCGTTG AAGTTTTTGG ATAATAAGGC CATAGAGTTA TTACCTAAGG ATATTTCCAT CGGTTACACC GGCGAATCTA AGGACTTTAA AGAAAACCAG AGCAGCATCT TAATTGTGTT TGGTTTAGCG CTCCTGGTGG CTTATCTGGT ACTGGCGGCG CAATTTGAAA GCTTTATCAA CCCCTTAGTG GTGATGTTTA CCGTGCCTAT GGGGGTATTC GGTGGTTTCC TCGGCCTGTT GGTCACCAGT CAAGGCATTA ACATCTATAG CCAGATTGGG ATGATCATGT TGATTGGTAT GGTGACTAAA AACGGTATCT TAATCGTCGA GTTTGCCAAC CAATTGCGTG ACCGAGGTTT AGCCTTAGAC AAAGCCATTA TCGACGCTTC GACTCGTCGC TTACGCCCCA TTCTGATGAC AGCCTTCACC ACCTTAGTAG GTGCTGTGCC GCTGATCTTC TCATCGGGCG CAGGCTCTGA AAGCCGGATT GCCGTAGGTA CTGTAGTGTT CTTCGGTATG GCCTTTGCCA CCTTTGTGAC CCTGTTCGTG ATCCCGGCCA TGTACCGCTT AATCTCGGCC GCGACCCATT CACCGGGTTA TGTTGAGGCC AAACTCGAAG CGGCCATAAA AGCGCAAGAA TTAGCAGCTC AAGAATTAGC TGCGCAAGAG GCTGTAAAAC AACAGGAACA AACAGCCAAA GCCTAG
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Protein sequence | MWLSDVSVKR PVVAIVLSLL LCVFGLVSFT KLSVREMPDV ESPVVTVSTS YSGASAAIME SQITKTLEDE LTGISGIDEI TSTTRNGSSR ITVKFLLGWN LTEGVSDVRD AVARAQRRLP EDANDPVVSK DNGSGEPSVY VNLSSSVMDR TQLTDYAQRV LEDRFSLISG VSSISISGGL YKVMYVKLRP EQMAGRNVTV TDITNALRKE NVETPGGQVR NDTTVMSVRT KRLYYTPKDF DYLVVRTASD GTPIYLKDVA DVAVGAQNEN STFKSDGIVN LSLGVITQSD ANPLIVAQEV HKEVDRIQDF LPEGTSLVVD FDSTVFIDRS INEVYNTLYV TGALVVLVLY IFIGQARATL IPAVTVPVSL ISAFIAANMF GYSINLLTLM ALILAIGLVV DDAIVVVENI FHHIERGEEP LLAAYKGTRE VGFAVVATTA VLVMVFLPIS FMEGMVGLLF TEFSVMLAVS VLFSSLIALT LTPVLSSKLL KANVKPNRFN RFVDSGFARM EKVYRVGVTH AIRFRLLAPL VILACVGGSV WLMQQVPSQL APQEDRGVLF AFVKGAEGTS YNRMTANMDI VEDRLMPLLG QGVLRSFSVQ APAFGGRAGD QTGFVIMQLE DWEHRHVTAQ QALGIISNAL KDIPDVMVRP MMPGFRGQSS EPVQFVLGGS DYAELFKWAQ VLKEEANASP MMEGADLDYA ETTPELIVTV DKERAAELGI SVDEVSQTLE VMLGGRKETT YVDRGEEYDV YLRGDENSFN NVGDLSQIYM RSAKGELVTL DTVTHIEEVA SAQKLSHTNK QKSITLKANI SKGYTLGEAL KFLDNKAIEL LPKDISIGYT GESKDFKENQ SSILIVFGLA LLVAYLVLAA QFESFINPLV VMFTVPMGVF GGFLGLLVTS QGINIYSQIG MIMLIGMVTK NGILIVEFAN QLRDRGLALD KAIIDASTRR LRPILMTAFT TLVGAVPLIF SSGAGSESRI AVGTVVFFGM AFATFVTLFV IPAMYRLISA ATHSPGYVEA KLEAAIKAQE LAAQELAAQE AVKQQEQTAK A
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