| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1138 |
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| Symbol | |
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| ID | 4256738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1320472 |
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| End bp | 1321998 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638121759 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_737194 |
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| Protein GI | 114046644 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTATTC TGGGATTTAT CGGTTTAGCA TTGGTTATTA TCTTGATAGC CGTGCTCTAT
ATTTTACTTG CAAGATATCA GGCTCTGCGG CTACAGCAGC GATTTTTGGC GCAGTTATGC
CCCCAGCTCG ATCAACAAAA GATTGAACGC CGCCCCCTTA ATATTCCTAT CGTGCCGCAG
GAGTTTGCGC CCCTGTACCA CTCCTTAAAT GAGATGCTCG CAGCGCTGCC TGCGGGTATG
GGCAAGGACA AACTCACTGG GCTGAATAAC CGTGTCGGAC TCAAGCGCTC ATTGACGGCT
ATGATGCCTA TCACCCATGG CACCTTAGTG CTCATCGATA TCTATCGTTT TCGCTATGTG
AATGATCTCT TTGGTTTTGT ATTTGGGGAT ATTCTGCTTA AACAGTTTGC CGATCGCTTA
ACCAGCTTAA GTCTTAAACC TAAGTTGATT GCGCGTCTAA ACGGTGATGA GTTTTTCCTC
TATTACGAGC AAAGTCTGTC CGAGGAGCAA TTGCTGCATT TACGTGGCCG TTTACAAGTT
CCCTTTAAAA TTAAAGATAC GCCTGTGAGT GTGCGAATGC AGATTGGTTG TTTGCAATTG
GCTGAGCACC ATACCGATGT GAGCCATATG CTCAGAAGGC TAGATCTCGC CCTTAAAAAG
GCTCGTGCCA CTCGCAGCGC CATCGCCTGT TACAGTGAGA ATGATGATAT TCGTCAGTTG
AGGGAGCTTA AGATTATCGA CAGTCTTCCC AGTGGCTTAC AGCGGAATCA TCTGTATATG
GTGTATCAGC CTAAGCAGGA TATTCACACT GGAGCTTGCA CCCAAGTAGA GGCTCTAATT
CGCTGGGAGC ATGAGGAACT CGGGTTTATT TCCCCCGCAG AATTCATTCC GCTGGCAGAA
TGCGCCGGCA TGATAGATCT AGTGAGCAAT TGGGCGCTGG AGCAAGTGCT ACAGCAGCAA
GTGAAATGGC GTGTAGCAGG TATCTCTGTA TGTGTGGCGC TGAACCTCTC GACCCGTGAT
CTCGATAGTG AAACCTTACC CAATGAGCTA GCGACCCGCC TCGAACATTA TAAATTATCG
CCAGAATGCT TAATGATTGA GATTACCGAA AGCACTCTGA TGGCCGATTT AAACAAGGCC
GTGGATACCT TGGAACAAAT CCGTCGCCTT GGGGTGAAAT TGGCGATCGA TGATTTTGGC
ACCGGCCATT CATCTCTGGC GTATTTAAAG CATTTACCCG CCAATGAAGT CAAAATCGAT
AAAGCCTTTC TTCGGGATCT TGAGCCGAAT AAGCCCTCTG AATATATCCT TGAGGCCAGC
ATCAATATCG CTAAAAAGCT CGGCTACGAG GTGACAGTAG AAGGTGTTGA AACGATCGAA
GTCCATGATA TGTTGGTGAA TATGGGCGTC GATCGTATTC AAGGGATTGT TTATGCTAAG
CCTATGCGGG CCGCAGAGCT TGAAATGAAC TGGGAGCAGC TTCGGCCAAC GCCTGAAATG
CTCTGCGTGA ATGGTTCACA TCCCTAG
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| Protein sequence | MVILGFIGLA LVIILIAVLY ILLARYQALR LQQRFLAQLC PQLDQQKIER RPLNIPIVPQ
EFAPLYHSLN EMLAALPAGM GKDKLTGLNN RVGLKRSLTA MMPITHGTLV LIDIYRFRYV
NDLFGFVFGD ILLKQFADRL TSLSLKPKLI ARLNGDEFFL YYEQSLSEEQ LLHLRGRLQV
PFKIKDTPVS VRMQIGCLQL AEHHTDVSHM LRRLDLALKK ARATRSAIAC YSENDDIRQL
RELKIIDSLP SGLQRNHLYM VYQPKQDIHT GACTQVEALI RWEHEELGFI SPAEFIPLAE
CAGMIDLVSN WALEQVLQQQ VKWRVAGISV CVALNLSTRD LDSETLPNEL ATRLEHYKLS
PECLMIEITE STLMADLNKA VDTLEQIRRL GVKLAIDDFG TGHSSLAYLK HLPANEVKID
KAFLRDLEPN KPSEYILEAS INIAKKLGYE VTVEGVETIE VHDMLVNMGV DRIQGIVYAK
PMRAAELEMN WEQLRPTPEM LCVNGSHP
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