| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1115 |
|---|
| Symbol | torD |
|---|
| ID | 4258757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 1290371 |
|---|
| End bp | 1291000 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638121736 |
|---|
| Product | chaperone protein TorD |
|---|
| Protein accession | YP_737171 |
|---|
| Protein GI | 114046621 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACG TCGATATCAA TCATGCCAGA GCCTTAGTGT ATCAGCTGCT GTCTTCTCTG
TTTGCCCGTG AAATTGATGA GCAGCGCCTT AAGCAACTCA CCAGTGAGCA AGCGCAACTA
TTCTGGACAC AACTGGGTTA TGCGTCCGAG TTTAGTGCAC CAGTAGCCAA TATACAGAAG
GTGCTGAATG GCTTAACGAG CGATGAAGCC TTGCTCGAGC TTGCCGCCGA TTATTGCGGT
TTATTCCTCG TAGGCACAAA GCACAGCGCC TCGCCCTATG CCAGCCTGTA CTTGAGCCCC
GAGGAAGAAC CCTTGCTATT TGGGCAGCAG CATCAACAAA TGAGCGAGTT TTTACACCAG
AGCCAACTGC AAGTGCAGAG TCACTTCCCA GAGCCTGCCG ATCACTTAGC CGTGATCCTC
GCCTATATGG GACACTTAAC TTGCCACAGT GAAGATGCAG CCCAGTTAAG CTTTCTAAAT
GCTTGTATAG ACTCTTGGTT AGCCAAGTTT GTCGCCAAGG TCGTTGAGTG TGATAGCAAG
CACAGCAATG GCTTTTACAG TGCCCTTGCC ACGCTGACGC TGGCTTGGGT GCAGCAAGAT
AAACAGCAGT TAGAACAGGC AATCAATTGA
|
|---|
| Protein sequence | MSNVDINHAR ALVYQLLSSL FAREIDEQRL KQLTSEQAQL FWTQLGYASE FSAPVANIQK
VLNGLTSDEA LLELAADYCG LFLVGTKHSA SPYASLYLSP EEEPLLFGQQ HQQMSEFLHQ
SQLQVQSHFP EPADHLAVIL AYMGHLTCHS EDAAQLSFLN ACIDSWLAKF VAKVVECDSK
HSNGFYSALA TLTLAWVQQD KQQLEQAIN
|
|---|
| |