Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1114 |
Symbol | |
ID | 4258756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1287014 |
End bp | 1290067 |
Gene Length | 3054 bp |
Protein Length | 1017 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638121735 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_737170 |
Protein GI | 114046620 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR02956] TMAO reductase sytem sensor TorS |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCCTT TATCTTTATC GCGAAGTAGT TTAACCGGCA GACTCATGCT CGCCTTCGGC GTGCTTGGGG TATTGCTGTT GCTACTGGTT AGCTTAGGTA GCCTGAGTTT GCATTGGCTT AAACAGGCCG ACAGTTATCT GTATGAAGAA TCCTTACCCG CCTCTCAAGC CGCGCGCCAA TTAGTGCAGG CTTCTAATGC CTTATCCGAT GGCGTGACCC AGTTAGGCCA AGTGGAGGAC GAGCGGCAGC GGGAATTTAT CGGCCGTAAG CTCAGCCTTG AAAGCGCTAC AATGTTAAAT AGCATCAAAG TGTTACTAAC GTTGGATGTG AACGAAGATA ATCATTTATC CGTATTAGCT GGGCAAATCA TTGAGCAATT AACCTTATTG GGTAAGAGTG TCGGCCAGCG TATTACCTTA GGCGATGAGT TACAGCTCAG AGCTCGCGAA TTATCGATTG CCGCAGGCCG CGCCTCTGAG TTATTACAAT CCGAATTGGC GGTTGTCGAC TCGGCGATTT TGGCAAAACT CAGCCAAGCC TACCCAGATA TGGCGGGGGA TAAACGCAGT GGCCAATTGC TCGATGATGT GATTGAGCGA GAGTTAGATG TGCAGGAGCA GCTCAACCGT GCGCTCAAGT TAGTGCATCA AATTGCGCTG CTCAGTCAGT TATTTGAGGC ATCCGAATTA CAGTCCGAAC TGCAATTGAG TGTTCCCCGT TTATTGGCCA CCTTTGCCAG CACTACGCCT TCCCATCCGG CGGCGCAGAG TAAACCCGTA CTCGGAACGG CAATCGAGCA GGCATCGAGC GCGGTCACAC AGCCGCCAAG GGGTGATGTT GGCATCGATT TAATGGCGCT CACCACAGTA TCTGAGCTTA TTCGCGATCC CGGCAGGCTC AAGGCGCTAA AGGCGGAGCT GGCAATCCTT CTTCATACCC CAAAAATCAT TAAATTACAG CGAGAACTGA GCCAAAGCCT GCAGCGCCAA CAGCGGCAGC AACAGGAGTT AGCGGAAAAA CTCTATAGCC TCAACACGCT GGTGGACAGT GCGCTTAATC AACAGCAGCA GCGGGCAGAG CTTGCACGTA GCGATTATTT AATGCAGTTG TCCTACGCCC GTTTGGGGCT GTGGGGCACG GGCATCTTAA TGTTGGTGAT CATCGGTGTG GTGGTTTACC GGGTGATCTA TCGCGGCATT GCCCTTAGAT TAAATCAGGC GACCGAAGCC ATGTCGCGCT TAAGTTTAGG GGACACCAAT GTGAGCCTCG ATGCCCACGG CGATGATGAA TTAACCGCCA TGGCCAATGC TATCGAGGCA TTTAAGCGAA AAACCGCCCA TAACCTGAAA TTGCAGGCGG ATTTACGCCA GGTGGCCGAT GAGCTGACCG AGCATAAAAA GGCTCTCGAA CAAACCGTGG CCACGCGGAC CCAGGAATTG GCCGAAGCCA ACCTGCGCCT CGATGCGGAG GCCAAAGGCC ATGCTAAGGC AAGAATTATT GCCGAGGAGG CGAGTCAGGC AAAATCCCAA TTCCTAGCGA CCATGAGCCA TGAGATTCGC ACCCCGCTCA ATGGTTTACT CGGTACACTC ACCTTGCTCG GCCATAGTCA GTTACCGCCC GTGCAGCAAC AGATGCTCGC GCTGTCGCAA TACAGCGGCA CGCTGCTGCA AACCGTGCTG AGCGATATTC TCGATTTCTC CCGCCTCGAG CAGGGTAATT TAACCAATGA GCCGCGGCCA ACGGATATCA ACGCCCTGCT CGATGAAGTG CTGGCGATCA TGGTGGCGGG CGCTAATTTA GCGGGATTGA GCCTAAGGCT GAATCGTCCC CAGTTACCCG CGTGTATTCA GATCGATGGC CCTAAGCTGA GGCAAGTGCT GTTTAACTTG ATTGGTAACG GCATTAAATT CACCCCCGAA GGCGGCGTGA GTCTCAATGT CAGCGTGCGA GGCGCTAAGT TGGCCTTTGT GGTGGCCGAT ACTGGGGTGG GGATTGCCCC CGAGGTGCGC GAGCAATTAT TTATGCCTTA CTGTGTATTG CCTAATCAGG GGCGCAGTCG TGGGACAGGC TTAGGGCTTG CCATCTGCAA ACAGTTAGTT GAACTGATGG ATGCACAGGG GCCGGGCATT TGGGTCAAGA GCGAGCCAGG CAAGGGCAGC GAGTTTGGTT TTGAGCTGAG TTTTACCCGG TGTGACAAGG CATTAGATAC GCAAACTCAG GTGCAAAAGC GGGTTAATCC CCAACGGGTG TTAGTGATTG AAGACAACAA GGTCAATGCC ATGGTCGCGC AGGGATTTTT GGCGCATTTA GGCCACAGTT CCAGTTTGGC CATCAGTTGT CAGCAGGCGA TAGCGCATGT GAGTGGCGAT AAGGCATTCG ATGCCGTGAT GCTCGATATT CAGCTGAGTG ATGGCTCAGG ACTCACGCTA TTACCCCAGT TAAAGGCGTT ATTCGCCAAT GACAATGTGA AGTTTGCCGC CTTTACCGCG CAGATGCAGA CGGAGGATCT TAGCCTGTAT CGGGAGGCGG GGTTTGATAC TGTGTTAGCC AAACCCTTGA GCTTGCAAAC CCTGGCAGAA TGGTTAGGCG TTGCGCGTGT GCCAGCTTCA ATGCCTGCTT TACCGTATGA GTCATCGTCG CAATCGGCAG AGTCACTTCA ATCGCCGAAT AATGCCGAAC CTACCAGCCA GAGCCATCAA GCTGAAACCT TGTTAGATCT TAATCAGTTA CAGCAAGATC TTGATGTCTT AGGCGTGAAA GCCGTGAGTG ATATGTTGGC GCTCTATCGA ACCTCCAGTG CCGAGCAAAT TGAGCGACTC TCGGCGCTAA GCTCTGTGGC GGGTTTCAGC GAGGGTGCAA AACTATTGCA CGCGCTTAAG GGCAGCAGTG CCAGCATGGG GCTAAAAGCA CTGACCGAGT GTTGTCAGCA GTGGGAGAAA ACACTCAACA CCACAGGGGA AAATGTATTG GATAGCAAAG CCGTCACTGA ATTAACCGCC TGCTGGCAGA CGTCGATGAC AGCGCTTGAG CAATGGCTTG CAACACAGGA TTAG
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Protein sequence | MAPLSLSRSS LTGRLMLAFG VLGVLLLLLV SLGSLSLHWL KQADSYLYEE SLPASQAARQ LVQASNALSD GVTQLGQVED ERQREFIGRK LSLESATMLN SIKVLLTLDV NEDNHLSVLA GQIIEQLTLL GKSVGQRITL GDELQLRARE LSIAAGRASE LLQSELAVVD SAILAKLSQA YPDMAGDKRS GQLLDDVIER ELDVQEQLNR ALKLVHQIAL LSQLFEASEL QSELQLSVPR LLATFASTTP SHPAAQSKPV LGTAIEQASS AVTQPPRGDV GIDLMALTTV SELIRDPGRL KALKAELAIL LHTPKIIKLQ RELSQSLQRQ QRQQQELAEK LYSLNTLVDS ALNQQQQRAE LARSDYLMQL SYARLGLWGT GILMLVIIGV VVYRVIYRGI ALRLNQATEA MSRLSLGDTN VSLDAHGDDE LTAMANAIEA FKRKTAHNLK LQADLRQVAD ELTEHKKALE QTVATRTQEL AEANLRLDAE AKGHAKARII AEEASQAKSQ FLATMSHEIR TPLNGLLGTL TLLGHSQLPP VQQQMLALSQ YSGTLLQTVL SDILDFSRLE QGNLTNEPRP TDINALLDEV LAIMVAGANL AGLSLRLNRP QLPACIQIDG PKLRQVLFNL IGNGIKFTPE GGVSLNVSVR GAKLAFVVAD TGVGIAPEVR EQLFMPYCVL PNQGRSRGTG LGLAICKQLV ELMDAQGPGI WVKSEPGKGS EFGFELSFTR CDKALDTQTQ VQKRVNPQRV LVIEDNKVNA MVAQGFLAHL GHSSSLAISC QQAIAHVSGD KAFDAVMLDI QLSDGSGLTL LPQLKALFAN DNVKFAAFTA QMQTEDLSLY REAGFDTVLA KPLSLQTLAE WLGVARVPAS MPALPYESSS QSAESLQSPN NAEPTSQSHQ AETLLDLNQL QQDLDVLGVK AVSDMLALYR TSSAEQIERL SALSSVAGFS EGAKLLHALK GSSASMGLKA LTECCQQWEK TLNTTGENVL DSKAVTELTA CWQTSMTALE QWLATQD
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