Gene Shewmr7_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1089 
Symbol 
ID4257996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1254955 
End bp1255410 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content46% 
IMG OID638121710 
Producthypothetical protein 
Protein accessionYP_737145 
Protein GI114046595 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00297736 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0584009 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAACAT TAGAATCCAG ACTGGTAGAC ATGCTCACAG TGCCTGTGGA AGCACTCGGC 
TTCCAACTTT GGGGCATTGA ATATGTGCAA GCGGGTAAGC ATTCGATCCT GCGTGTGTTC
ATTGATGGTG AGAATGGTAT CAATATTGAA GATTGTGCCA ACGTAAGTCG CCAAGTCAGT
GCTGTGCTGG ATGTTGAAGA CCCAATTTCT ACTGAATATA CCTTAGAGGT TTCTTCGCCA
GGCGTAGATA GACCCTTATT TACTGCTGAG CAATATGCGG CCTATGTCGG CGAGGATGTC
AAGCTTCAAC TGACTATGCC TGTCGCGGGC AGTCGTAATT TAAAAGGCGC CATTACACAG
GTTGACGGCC AAATGTTGTC GCTAAATGTG AATGGTAAAG AGCTGGTTGT CGCCTTGGAT
AATATCCGTA AAGGCAACAT CATCGCTAAG TTTTGA
 
Protein sequence
MATLESRLVD MLTVPVEALG FQLWGIEYVQ AGKHSILRVF IDGENGINIE DCANVSRQVS 
AVLDVEDPIS TEYTLEVSSP GVDRPLFTAE QYAAYVGEDV KLQLTMPVAG SRNLKGAITQ
VDGQMLSLNV NGKELVVALD NIRKGNIIAK F