| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1054 |
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| Symbol | |
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| ID | 4255530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1217932 |
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| End bp | 1218996 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638121666 |
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| Product | lytic murein transglycosylase B |
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| Protein accession | YP_737110 |
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| Protein GI | 114046560 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000218585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0074183 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTATTC TTCGAGCTTG TTTGGCTCCA CTGGCAGTGC TTTGCCTCAG TTCATACCTC
ATTGGCTGCT CGACAGCGAA CGAGCCAGCA ACAACGACAC CGCCACCAAG CGCGGTCGTC
ACCACACAGG CGCCAACACC TGTATTGCCC GAGGCCTTAA AGGCAGAGTT TATAAAAACC
CAAATGGCAC AAGGCTTTAC TCAAGCCGAA GTGGAAAGTT TCTTAGCCAA AGCCAACTAC
AACCAAGCGG TTATCGATGC GATTTCTCGC CCCTGGGAAG CTAAGCCTTG GCATCAGTAT
TATCCAATTT TCCTCACCGA GAAACGCCTC AACGCGGGCC TAGCCTTCTG GAAAAAACAC
GAGGCGACGA TCGCCAAAGC CGCCACTCAA TACCAAGTCG AGCCACAAAT TATTGTGGCC
ATTATTGGTA TCGAAACCTT CTATGGTCAG TACTCGGGCA ATTATCCGGT AATCGACGCG
CTCTATACCT TAGGGTTTTA TTACGAGCCA AGAGCCACTT TCTTTCGCAA GGAATTTGGC
GAGCTGATGA AGCTGGTAAA AGAAGAACAC TTAGATATCA ATAGCCTCAA GGGTTCTTAC
GCTGGCGCAA TGGGCTTTGG CCAGTTTATT CCGTCAAGCT ACCGCCATTA TGCCGTGGAT
TTTGATGGCA GCGGCAACCG TGATTTACTC CAGAGTCCAG AGGATGCCAT TGGCAGTGTT
GCCAATTATT TCCATGAACA CGGCTGGCAA TTGCACGCGC CCGTTGCGCT CCCTTTAGTG
AACAGCAGTG CCAATGCGCC TAAAGCCAAA GTGTGGGCCG GCGAGAAGTT GCAGTACAAG
GTTTCTGATA TTCTCTCTCC AAGCTTATCG CTGGCCAATG CCCGTGATTT AAATGCCTCG
CAAAAGGCCA TGCTCATTGA GCTGGAACAA GTGGATAGCA AGGACTACTG GTTAGGACTC
AATAACTTTT ATGTGATCAC CCGTTATAAC CGTAGCCCTT TGTATTCCAT GGCCGTTTAC
CAATTTAGCC AACAACTGAA GCAACAACAT GACGCTAAGA AATAA
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| Protein sequence | MPILRACLAP LAVLCLSSYL IGCSTANEPA TTTPPPSAVV TTQAPTPVLP EALKAEFIKT
QMAQGFTQAE VESFLAKANY NQAVIDAISR PWEAKPWHQY YPIFLTEKRL NAGLAFWKKH
EATIAKAATQ YQVEPQIIVA IIGIETFYGQ YSGNYPVIDA LYTLGFYYEP RATFFRKEFG
ELMKLVKEEH LDINSLKGSY AGAMGFGQFI PSSYRHYAVD FDGSGNRDLL QSPEDAIGSV
ANYFHEHGWQ LHAPVALPLV NSSANAPKAK VWAGEKLQYK VSDILSPSLS LANARDLNAS
QKAMLIELEQ VDSKDYWLGL NNFYVITRYN RSPLYSMAVY QFSQQLKQQH DAKK
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