Gene Shewmr7_1042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1042 
Symbol 
ID4255518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1206546 
End bp1207538 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content40% 
IMG OID638121654 
Producthypothetical protein 
Protein accessionYP_737098 
Protein GI114046548 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00168433 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTTAACA CACTAGACAC CCCTATTTTT GAAAACTACA AACTCATCTC GAATGTTAAT 
CGGTACCGCA ACATCATTAC CACCCAACTT GCGGCTATCG AAGCAAGGAC GCAACGCGCC
GAACAAATTT GGAAAACTAA AAATATTATC AACCAATTGC CACAGCAAGT GATTAAAGGC
ACACACTCCC CTCAGATTGC ATTCGATACG CTCAACAGAA TAAAAACAAA ATCACAAGTT
GCCATCAGCT CGATATTATT ACTACGAGCC ATTGACCGTT CCACTAGGAA AGTTGAAAAA
ATAACAAAAG AACAAGAAGA AACTAGCCTG CGACTAAAAC AAGAACAGTA TGAACGCGAA
CAAGCACTAC AGCGACAAGC TGAACAAAAC AAACGTCGGG TCAGTAATGA GGTCCACATT
TTCATTAATC AACTCAATAC AACTGGGTTC ACAGAGATGC CCATCAGTAG TAGTTATGAT
GAGATCAAAT TCAGAAGACT ACAACATGAA TGCAACCAAC AAGAGCTGCA TGAACTCAGA
TTCAATATTG AACAAGCCTA CTCTCAAGCT TACACCAACC TGAAAGATAC TTATCTACTG
ACACATTTTC CACTTACTTC TTCTGGATGG AACGCCAATA CCAATTTCAC CACCGAACTA
AATAAGCTCT TTGGTTGGCA ACGAAATGTG TTTTACACAA AGTCAGTTGC AGATAAACAA
GGTGCAATGA AAAAATCATG GTGTGCAGAA CTACTCACGT ATTTCATCCA CACAGTACTC
TACGAACTTG ATGAACTCTA TCAGGAACTT CATGGAGAAC CCCACATCGA TCAAGTTATA
CAAGTAAAAA AATATGGTGG CACCCACGCC AGAAGACTAA CCTACATCTT GAAAATGATT
ATCAACCAAG GAAGTCTTAT CACGAGCGAT GATAAAGCGA AAGCAAACTG GCTCAAAAAA
CTCGTCTTGC AAAAATCTCT GGTGAACAGA TAG
 
Protein sequence
MLNTLDTPIF ENYKLISNVN RYRNIITTQL AAIEARTQRA EQIWKTKNII NQLPQQVIKG 
THSPQIAFDT LNRIKTKSQV AISSILLLRA IDRSTRKVEK ITKEQEETSL RLKQEQYERE
QALQRQAEQN KRRVSNEVHI FINQLNTTGF TEMPISSSYD EIKFRRLQHE CNQQELHELR
FNIEQAYSQA YTNLKDTYLL THFPLTSSGW NANTNFTTEL NKLFGWQRNV FYTKSVADKQ
GAMKKSWCAE LLTYFIHTVL YELDELYQEL HGEPHIDQVI QVKKYGGTHA RRLTYILKMI
INQGSLITSD DKAKANWLKK LVLQKSLVNR