Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1042 |
Symbol | |
ID | 4255518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1206546 |
End bp | 1207538 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638121654 |
Product | hypothetical protein |
Protein accession | YP_737098 |
Protein GI | 114046548 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00168433 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCTTAACA CACTAGACAC CCCTATTTTT GAAAACTACA AACTCATCTC GAATGTTAAT CGGTACCGCA ACATCATTAC CACCCAACTT GCGGCTATCG AAGCAAGGAC GCAACGCGCC GAACAAATTT GGAAAACTAA AAATATTATC AACCAATTGC CACAGCAAGT GATTAAAGGC ACACACTCCC CTCAGATTGC ATTCGATACG CTCAACAGAA TAAAAACAAA ATCACAAGTT GCCATCAGCT CGATATTATT ACTACGAGCC ATTGACCGTT CCACTAGGAA AGTTGAAAAA ATAACAAAAG AACAAGAAGA AACTAGCCTG CGACTAAAAC AAGAACAGTA TGAACGCGAA CAAGCACTAC AGCGACAAGC TGAACAAAAC AAACGTCGGG TCAGTAATGA GGTCCACATT TTCATTAATC AACTCAATAC AACTGGGTTC ACAGAGATGC CCATCAGTAG TAGTTATGAT GAGATCAAAT TCAGAAGACT ACAACATGAA TGCAACCAAC AAGAGCTGCA TGAACTCAGA TTCAATATTG AACAAGCCTA CTCTCAAGCT TACACCAACC TGAAAGATAC TTATCTACTG ACACATTTTC CACTTACTTC TTCTGGATGG AACGCCAATA CCAATTTCAC CACCGAACTA AATAAGCTCT TTGGTTGGCA ACGAAATGTG TTTTACACAA AGTCAGTTGC AGATAAACAA GGTGCAATGA AAAAATCATG GTGTGCAGAA CTACTCACGT ATTTCATCCA CACAGTACTC TACGAACTTG ATGAACTCTA TCAGGAACTT CATGGAGAAC CCCACATCGA TCAAGTTATA CAAGTAAAAA AATATGGTGG CACCCACGCC AGAAGACTAA CCTACATCTT GAAAATGATT ATCAACCAAG GAAGTCTTAT CACGAGCGAT GATAAAGCGA AAGCAAACTG GCTCAAAAAA CTCGTCTTGC AAAAATCTCT GGTGAACAGA TAG
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Protein sequence | MLNTLDTPIF ENYKLISNVN RYRNIITTQL AAIEARTQRA EQIWKTKNII NQLPQQVIKG THSPQIAFDT LNRIKTKSQV AISSILLLRA IDRSTRKVEK ITKEQEETSL RLKQEQYERE QALQRQAEQN KRRVSNEVHI FINQLNTTGF TEMPISSSYD EIKFRRLQHE CNQQELHELR FNIEQAYSQA YTNLKDTYLL THFPLTSSGW NANTNFTTEL NKLFGWQRNV FYTKSVADKQ GAMKKSWCAE LLTYFIHTVL YELDELYQEL HGEPHIDQVI QVKKYGGTHA RRLTYILKMI INQGSLITSD DKAKANWLKK LVLQKSLVNR
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