Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1000 |
Symbol | |
ID | 4255300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1155302 |
End bp | 1156111 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638121611 |
Product | peptidase M48, Ste24p |
Protein accession | YP_737056 |
Protein GI | 114046506 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00216639 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.966911 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAA CTTCACTCGC CTTAGTGGCG ATTGGACTCA CGTTAGGATT ATCGGGGTGC GCGACCACTA AATCGCCCAC GGGGCGTGGC CAAACCTTGC TGTATTCGGC ATCGCAAATG CAGCAAATGG GGGATGCATC TTTTGAAGAA ATGAAAAAGC AGCAAAAGAT CAGCAGCGAT AAAAAGCTCA CCCAGTATGT AAATTGCGTG GCGAATCGTG TCACCGCTGT GTTGCCCGAT CAAAGCCAGA AGTGGGATGT CGTCTTGTTC AACTCCGAGC AAGTGAATGC CTTTGCGCTG CCTGGCGGAC ACATTGGCGT GTATACCGGC TTATTAAAAG TCGCGAGTAC CCCGGACCAA CTGGCAACTG TATTGGGCCA TGAAGTGGCC CACGTCTTAG CCCAGCACGG CAATGAGCAG GTCTCTCGGG CGCAGATGAC CGGCATGGGG ATGCAAATCG CCGATGCCGC CCTTGGCGCG AGTGGCGTCT CAAACCGTGA CTTATATATG TCGGCCTTAG GACTGGGTGC GCAGGTTGGG GTGATTTTAC CCTTTGGTCG CGCTCAGGAG AGTGAGGCGG ATGTGATGGG GCTGGAGTTG ATGGCGCGGG CAGGGTTCGA CCCTGCGCAG AGCGTAGTGC TTTGGCACAA CATGTCGAAA GCGGGCGGTA GCCAAGGGCC AGAGCTGTTA TCGACACATC CATCAAACAA CAATCGCATC GCCCAACTCG AGCAATTACA GGGGCAAATG CAGCCTTTGT ATCAGAGCGC AAAGGCGAGT GTTAAAAACC AATGCGCGTT GCCTAAATAG
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Protein sequence | MKATSLALVA IGLTLGLSGC ATTKSPTGRG QTLLYSASQM QQMGDASFEE MKKQQKISSD KKLTQYVNCV ANRVTAVLPD QSQKWDVVLF NSEQVNAFAL PGGHIGVYTG LLKVASTPDQ LATVLGHEVA HVLAQHGNEQ VSRAQMTGMG MQIADAALGA SGVSNRDLYM SALGLGAQVG VILPFGRAQE SEADVMGLEL MARAGFDPAQ SVVLWHNMSK AGGSQGPELL STHPSNNNRI AQLEQLQGQM QPLYQSAKAS VKNQCALPK
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