Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0978 |
Symbol | |
ID | 4256525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1126039 |
End bp | 1126647 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638121589 |
Product | Na(+)-translocating NADH-quinone reductase subunit E |
Protein accession | YP_737034 |
Protein GI | 114046484 |
COG category | [C] Energy production and conversion |
COG ID | [COG2209] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE |
TIGRFAM ID | [TIGR01940] NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.645271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACATT ATATTAGCCT GTTAATTCGC TCTGTTTTCA TCGAAAACAT GGCACTGGCC TTCTTCTTAG GTATGTGTAC TTTCTTAGCG GTATCGAAGA AAGTGACTAC TGCAATGGGC CTGGGGATTG CGGTAGTTGT AGTGTTAACT ATCTCTGTTC CTGCTAACCA AGTTATTTAC CAAGGGCTGT TAGCACCTGG CGCACTGGCT TGGGCTGGTG CACCTGAAGC TGACCTAAGC TTCTTGAAAT TCATTACCTT TATCGGTGTG ATTGCGGCTT TAGTTCAAAT TCTGGAAATG GCACTGGATA AGTACTTTCC TCCTTTGTAC AACGCGTTAG GTATCTTCTT ACCTCTAATC ACTGTGAACT GTGCGATTTT CGGTGCGGTA TCATTCATGG TTGAGCGTGA CTACAAGCTG GGCGAAAGTG TGGTGTTTGG TTTCGGCTCT GGAGTAGGTT GGGCATTAGC TATCGTATTG ATGGCCGGTA TCCGTGAGAA GCTGAAGTAT GCCGATGTGC CGAATGGCCT GCGTGGTTTA GGTATTACCT TTATTACCGC TGGTTTAATG GCCTTAGGTT TCATGTCGTT TTCTGGTGTG TCTCTGTAA
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Protein sequence | MEHYISLLIR SVFIENMALA FFLGMCTFLA VSKKVTTAMG LGIAVVVVLT ISVPANQVIY QGLLAPGALA WAGAPEADLS FLKFITFIGV IAALVQILEM ALDKYFPPLY NALGIFLPLI TVNCAIFGAV SFMVERDYKL GESVVFGFGS GVGWALAIVL MAGIREKLKY ADVPNGLRGL GITFITAGLM ALGFMSFSGV SL
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