Gene Shewmr7_0968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0968 
Symbol 
ID4255602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1115062 
End bp1116195 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content49% 
IMG OID638121579 
ProductrRNA (guanine-N(2)-)-methyltransferase 
Protein accessionYP_737024 
Protein GI114046474 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2813] 16S RNA G1207 methylase RsmC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC AATTTTCAGT GGCAGGGATT GAGCTTGAAC TATTTCGCTA TCCCGCTTCG 
CAGGAATCCA ATCTCCAAGC TTGGGATGCG GCAGACGAGC ATTTGATTAA CACCCTAGTC
GAAGGCGGAC AAACCGCTGT GCCAACGGCC ATTATCAACG ACAGCTTTGG CGCCTTAAGC
TGTGCCCTAT CGCGGCTCAC TCCCGATTGG CCGCTGAATG TCGAAACCGA TGCCAGAACC
AGTTTTTTAG GTGCAGAGCA AAATCATCAT CGCAATCAGT TGTCTATGGA AAACCTCACC
TGGTTTACCA GTCGCGATGC CTTGCCAAGC GATCTCGCCC TCGTATTGAT GAAGCTGCCT
AAAAACCTCA CTTACTTTGC CCACCAGCTA ATGCGCTTAT CTCAAGTGTT GCCCGCGGGC
AGTAAAGTGT TGGTTGGCGC AAAAGCCAAA TCAATCAACA CCAGTTTATT GGAAGTCTTT
GCCAAATACT TAGGGCCAGC GAGCGCCAGC CTCGCGTGGA AGAAAACCCG CGTCATCACC
TGTATTAGCG ATGGTAAGCC ACGTGCCTTG CCAAAGGAAA TCACTTGGGA TATTCCCGAA
TTTAATCTCC ACATCAGTAA TTTAAGCAAT GTGTTTGCCG CCAATAAACT CGATATCGGC
GCACGCATTA TGTTGGATAA CCTCCCTCAG GGCGATTTTA AAACAATTGT CGACCTAGGT
TGTGGTAATG GCGTGCTCGG TCTGCGTGCC GCCCAGTTAT ACCCAAATGC CGATATCCAT
TTTATTGATG ATTCCGAAAT GGCGGTGGCC TCGGCAAAAG CCAATTGGGC AAACAACCAA
CTCCCCGCTG AAACAGGCCA TTTTCATTGG GACGATTGTA TGACCCATTT ACCCGATGGA
GTCGAACCCG ATTTAGTGCT CTGCAACCCG CCCTTCCATC AGGGCGAGGC GATTACCGAT
CACATTGCTT GGCAGATGTT TTTAGACGCG CGTCGCCGAC TCAAAAATGG CGGCATTTTA
CATATAGTGG GTAATCGCCA CTTGGCTTAT CACGTGAAAT TGCAGCGTTT ATTTAAAAAC
TGCACTACTG TTGCCTCCAA CGGCAAATTT GTGATCCTGC AAGCGCAGAA ATAA
 
Protein sequence
MTTQFSVAGI ELELFRYPAS QESNLQAWDA ADEHLINTLV EGGQTAVPTA IINDSFGALS 
CALSRLTPDW PLNVETDART SFLGAEQNHH RNQLSMENLT WFTSRDALPS DLALVLMKLP
KNLTYFAHQL MRLSQVLPAG SKVLVGAKAK SINTSLLEVF AKYLGPASAS LAWKKTRVIT
CISDGKPRAL PKEITWDIPE FNLHISNLSN VFAANKLDIG ARIMLDNLPQ GDFKTIVDLG
CGNGVLGLRA AQLYPNADIH FIDDSEMAVA SAKANWANNQ LPAETGHFHW DDCMTHLPDG
VEPDLVLCNP PFHQGEAITD HIAWQMFLDA RRRLKNGGIL HIVGNRHLAY HVKLQRLFKN
CTTVASNGKF VILQAQK