| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0926 |
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| Symbol | mdoD |
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| ID | 4255348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1058083 |
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| End bp | 1059897 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638121537 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_736982 |
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| Protein GI | 114046432 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000374583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.530607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGATT CTGGCGAACT GATGGAGATA GAGGTATGGT TATCACTGTC ATCAACAGTT
CTCCACAGGG CAGTCACTGC AATATTGCTT ACTTTTGCAG AGAAGTGTCA GGAAGTTACA
CCAAATCAGA GTCTGCTTAT GCAACCCAAT TTATTTCCCG AACAAAGACA TTTAAATCGT
GAGCCGATGG TGATGCCGTC GGTGGAAGCT CAGTCTACCC GTAGCCGTTT ACAACGCATG
GTGGGCAGTG TGCTACTCAC TTGCAGCGTG TTGTTAAGCT TATCTGCTTG TGCAGCGGGT
AAGGCGAGCG CACCGCAGGA AGAAGAGTTT AGCTACGCCT GGTTGAAAGG CTATGCCCAT
ACGCTGGCGG CTGAGTCCTA TGTGAGCCAT AAGGGCGAGT TACCAAAAAG CTTACAGGGC
ATGAGCTGGG ATGATTACCA GCAGTTCCAT TTCAAGAAAA AAGCCGCCCT GTGGCGTGAG
GATGATTCGG AGTTTCGCGC CGAGTTATTC CACTTAGGTC TGTACTTCGA TACGCCTGTG
CATATTTACC AATTGGAAAA TGGCAAGGCT AAGCTGATCG AATATTCGTC TTCCATGTTC
GATTACGGTA AATCCAAGGT AAAGGGTAGC CAGCTACCAA AAGACCTAGG CTTTGCTGGG
TTTAGAATGC AGTTTAATAC CGACTGGCAG CGTGACGTGG TCGCCTTCTT AGGTGCCAGC
TATTTCCGCG CCGTAGGTCA GGAAATGCAA TATGGTCTAT CTGCCCGTGG TTTAGCGGTA
GACACTGCGC TGCCTAAGCC TGAAGAATTT CCTATGTTTA CCCGTTTCTG GTTAGAGAAA
CCACAACCGG GTTCTAATAT TGCGACTGTG TACGCTCTGT TAGATTCACC AAGTGTAACA
GGGGCTTACC GTTTTGATAT CGAACCGGGT GAGCGTTTAA AAATGAAGGT CGATGCGGCG
ATTTACCCGC GTAAAGCCAT CGAACGTTTA GGCGTTGCAC CACTGACCAG TATGTACATG
GTGGGTGAAA ACGATCGCCG CACCGGTTAC GACTGGCGCC AAGAGATCCA CGATTCAGAC
GGTCTTGCCA TGCACACAGG TAACGGTGAA TGGATTTGGC GTCCGCTGGG TAACCCAAGC
AACCTGCGTT TCAATGCCTA TAGCGATGAG AATCCAAAGG GCTTTGGTTT AATGCAGCGC
GACCGTAATT TCGACCATTA TCAAGATGAT GGTGTGTTCT ACGAGAAGCG TCCAAGCCTG
TGGATTGAGC CAACTGGCAA CTGGGGTAAA GGTTCGGTGC AGTTAGTGGA AATTCCAACA
CTGGATGAAA CCTTCGACAA TATCGTGGCG TTTTGGAATC CTGCAGAGCC CATTCAACCG
GGTCAAGAGT TGCTCTACAG CTACAACATG TACTGGGGCG GTATTCCACC TGTGCAGTCA
CCCCGTGCCC GCGTAGTCGA TACCTTTACT GGTATTGGTG GTGTGGTTGG TCAAAAGCGT
AAGTACTATA GCAAGCGCTT TGTGATTGAT TTTGCTGGTG GTTCCTTACC TATGCTGGGT
AAAGATACCC AAGTGAAAGC GGTGATTTCG ACCTCTCAGG GTCGTGTAGA AATCGAATCT
GCTCGCCCAC AACATGCGAT CAACGGTTAC CGCGCTATGT TTGACCTAGT GCCGCCAGAA
GACAGCGTTG AGCCGATTAA CCTCAGAGTT TACTTAGAGG TAGATGGTCA GCCATTAACT
GAGACTTGGA TGTACCAGTG GACACCACCA CCAGTGAACG AGCGTGAGTT GCATAACGCC
GGTCATCTGC AGTAA
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| Protein sequence | MLDSGELMEI EVWLSLSSTV LHRAVTAILL TFAEKCQEVT PNQSLLMQPN LFPEQRHLNR
EPMVMPSVEA QSTRSRLQRM VGSVLLTCSV LLSLSACAAG KASAPQEEEF SYAWLKGYAH
TLAAESYVSH KGELPKSLQG MSWDDYQQFH FKKKAALWRE DDSEFRAELF HLGLYFDTPV
HIYQLENGKA KLIEYSSSMF DYGKSKVKGS QLPKDLGFAG FRMQFNTDWQ RDVVAFLGAS
YFRAVGQEMQ YGLSARGLAV DTALPKPEEF PMFTRFWLEK PQPGSNIATV YALLDSPSVT
GAYRFDIEPG ERLKMKVDAA IYPRKAIERL GVAPLTSMYM VGENDRRTGY DWRQEIHDSD
GLAMHTGNGE WIWRPLGNPS NLRFNAYSDE NPKGFGLMQR DRNFDHYQDD GVFYEKRPSL
WIEPTGNWGK GSVQLVEIPT LDETFDNIVA FWNPAEPIQP GQELLYSYNM YWGGIPPVQS
PRARVVDTFT GIGGVVGQKR KYYSKRFVID FAGGSLPMLG KDTQVKAVIS TSQGRVEIES
ARPQHAINGY RAMFDLVPPE DSVEPINLRV YLEVDGQPLT ETWMYQWTPP PVNERELHNA
GHLQ
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