Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0921 |
Symbol | |
ID | 4255343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1053422 |
End bp | 1054312 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638121532 |
Product | LysR family transcriptional regulator |
Protein accession | YP_736977 |
Protein GI | 114046427 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.422562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTTA AAGTGCTGCG TTATTTTATC GAGATCATCG ATGCCGGCGG TTTTGGTAAG GCCAGCGAAA AGGTTCATCT CACCCAACCC GCCCTCTCCA AGGCGCTGCG CCAATTAGAG GAAGAGCTCG ATCTGGTGCT ACTCGAGCGC GGCAAACGTG GCACTCAGGT TAAGCTCACC CAAGCGGGAG AAGTGGTCTA TCGCCATGGC AAGGAGTTAC TCGCTGGCCG ACAACGCATG CTGGCCGAAC TCAGTGCCCA GCGCAGTTTA ACCGCAGGCG AATTAAAACT CGGTCTCGCG CCACTCGGCA GTGCTGAAAT TTTTGCCCCA ATCATTGCCA AGTATCGCCA GCAATATCCG CAAATCGATA TGCATTTATT GGTTCGCGGC GGCGTGGAGC AAACCTTAGC GATTCAAAAA GGTGAAATTG AACTGGCAAC TGGGATTATT AACTTCGACG ATGGTTACCA CGGTATTCGA GTGTTTAACG ATCCTATGGT GGTGGTGCTG CCCAAGGAGA ATCCCCTCAC CTCACGAGCT ATGCTGTCGA TCCACGACTT AGTCGACGAG CCACAAGTGA TGTTTGAGAC CGAATACACC TTGTATCAAC TGGTGTTAAC CGCTTGCCAA CACGCCGGAT TTACCCCTAA AAACATCACT CGAGTCAGCC AAGCCGACTT CGGGATCGCC CTTGTGGCGG CGGGCACGGG CGTGATGATA CTGCCGCGCT CTATCGCGCG GCGTTACAGT GTATCGGGAG TGGTGAATAT TCCATTGGCA AGCGATGAAC TGCGCTGGGA GCTATCGCTG TTTTGGCGCA AAGAACAGGT ATTGTCCTTT GCGGCACAGG CGATGATTGC GTTAGTGGAG AAACACTTAA CTCAAAAGTA G
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Protein sequence | MDLKVLRYFI EIIDAGGFGK ASEKVHLTQP ALSKALRQLE EELDLVLLER GKRGTQVKLT QAGEVVYRHG KELLAGRQRM LAELSAQRSL TAGELKLGLA PLGSAEIFAP IIAKYRQQYP QIDMHLLVRG GVEQTLAIQK GEIELATGII NFDDGYHGIR VFNDPMVVVL PKENPLTSRA MLSIHDLVDE PQVMFETEYT LYQLVLTACQ HAGFTPKNIT RVSQADFGIA LVAAGTGVMI LPRSIARRYS VSGVVNIPLA SDELRWELSL FWRKEQVLSF AAQAMIALVE KHLTQK
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