Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0919 |
Symbol | |
ID | 4255341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1051485 |
End bp | 1052219 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638121530 |
Product | extracellular solute-binding protein |
Protein accession | YP_736975 |
Protein GI | 114046425 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.994657 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT CCATGTTATT AGGCGGCCTA GCTCTGACTG CCACCTTGTT GTTAGCTGGA TGTGGGAAAA GCAACGATGT CTTAGTGGTT GGCACTAATG CCGCCTTCCC GCCCTTTGAA TACGTTGGTG GACAAAGCGG CGACGAGATC AAAGGCTTCG ACATTGAGCT TGCCAAGCAA ATCGCTAAAG ATGCCGGCAA GACACTCAAA GTCGAAAACA TGAAATTCGA TTCACTGATC GTGGCACTCA ACTCAGGCAA GATTGATTTT ATCGCCTCGG GCATGACCAT CACGCCAGAG CGCCAGGCTA GCGTTAACTT TTCGGAGCCC TACTATGAGG CAACTCAAGT GCTACTCGTG AATAAAGATA ACGAGAGTAT TCATACCCTT GACGACATCA AAGACAAACA TTTTGCGGTG CAGCTCGGCT CAACCGCCGA TATGATGTCT AAAAAATACA CCCAAAATGT CACCGCCTTT AACACCGGCT TCGAAGCCAT CATGGAACTG AAGAATGGCA AAGTCGACTT AGTGCTATTC GATAGCGAGC CTGCGGCGAA CTATCTGGCG AAAAATCCCG ATCTCAAATT GATCAAGCTG GATTTCCCCC CAGAGTTTTA TGGCTTTGCG GTATCAAAGC AGCAGCCAGA ACTTCTCAAT AGCATTAATA ACACGCTGAA AAACTTGAAA GAAAGCGGTC AATATCAGAC GCTCGTTTCA GCCCATATCA AGTGA
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Protein sequence | MKKSMLLGGL ALTATLLLAG CGKSNDVLVV GTNAAFPPFE YVGGQSGDEI KGFDIELAKQ IAKDAGKTLK VENMKFDSLI VALNSGKIDF IASGMTITPE RQASVNFSEP YYEATQVLLV NKDNESIHTL DDIKDKHFAV QLGSTADMMS KKYTQNVTAF NTGFEAIMEL KNGKVDLVLF DSEPAANYLA KNPDLKLIKL DFPPEFYGFA VSKQQPELLN SINNTLKNLK ESGQYQTLVS AHIK
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