Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0884 |
Symbol | |
ID | 4256536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1010299 |
End bp | 1012023 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638121495 |
Product | potassium/proton antiporter |
Protein accession | YP_736940 |
Protein GI | 114046390 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00781318 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATGCAG ATTCCATCAA TAGTTTTTTT CTGATCGGTG CCTTGCTTGC CGCTGTGAGT GTTTTGTTAA GTCCCGTGTC TTCGCGCTTG GGTATCCCTA TCTTATTAAT TTTCCTCGCG GTAGGGATTT TAGCGGGGGA AGATGGTCCC GGCGGCATTC TGTTTGATGA CTACTCAACC GCTTATCTTG TCAGTAACTT AGCCTTAGCC ATTATCTTGC TCGATGGCGG TATGCGCACG CGGGTCGCAA GCTTTAGGGT GGCACTGTGG CCAGCATTAT CGTTGGCGAC CTTCGGAGTC GCTATCACCA CCAGTATCAC TGGTGTGATG GCCGCATGGC TATTTGACTT ACACTGGCTA CAAGGTTTGC TGGTGGGGGC AATTGTCGGC TCCACCGATG CGGCGGCGGT ATTCTCACTG TTAAAGGGGC GCAGCCTAAA TGAGCGTGTT GGCGCGACGC TGGAAATCGA ATCGGGCAGC AACGACCCTA TGGCGGTGTT TTTAACCGTG ACCCTGATTG CCATCCTAGG CAATGTGGAC GCCGAGCTAT CCGCAAGCTT TATGCTGATA AGCTTTATCA AGCAGTTTGG CTTGGGGATT TTCCTCGGCC TCGGTGGCGG TTGGCTGCTG TGGAAGCTCG TGAATCTAAG CAAGCTTGCC GAAGGTTTGT ATTCGATTTT AGTGCTCAGT GGTGGCCTGA TGATTTACGC CGCGTCGAAC AAACTTGGCG GCAGTGGCAT CCTGTCGATT TACTTAGTTG GTTTATTCCT TGGCAACAAG CCTACCCGTG GTCGCCATTC AATCTTAAAC GTGTTGGATG GCATGACCTG GGTCAGTCAA ATCGGTATGT TCCTGGTATT AGGGCTACTG CTCACACCGT CTGACTTGTT GGACATTTGG CTGCCAGGTT TAGCGTTAGC CTTTGGGATG ATCCTTTTTG CCAGACCGTT AGCCGTATGG CTCAGCTTGT TACCTTTTAA GAGTTTTAGC AGTCGTGACC GCTGGTTTAT CTCTTGGGTC GGGCTTCGCG GCGCCGTGCC GATTATTTTA GCGGTATTCC CTATGATGGC GGGATTACCG GGCGCTCAGT TGTACTTTAA CTTGGCGTTT TTCGTGGTGT TAGTGTCGCT GTTAGTGCAA GGGGCGTCAC TCACCACCGC GGCGCGTTTA GCTAAGGTCG AATTACCGCC TAAGCCATTA CCTATTTCAC GCTCTGGGGT CGAAATTTAC CCTAGCAGCG AGTGGGAAGT GTTTGTTTAT CGGTTGAGTG AAAACAAATG GTGTATCGGC GAGCCGCTTA AACGTCTTTC TATGCCTGAT GGGACCCGGA TTGCGGCGGT ATTTCGCCAT AACACACTGT TGCACCCATC GGGCAGCACC TGCCTCGAAG CGGGAGATAT TTTGTGCGTG CTCGGGCAAG AAAAGAGTCT AGAGGCTTTG AGTAACCTCT TTAGTCAGGC GCCTGAAACT AAAGAAGTAC CACGTTTCTT CGGGGACTTC TTTATCGATA CCGAGGTTAA GCTGCTGGAT CTGGCGCCAA TTTATGGTCT GGAGTTAGAC GAAGCAACCG GTGATATGAC TGTCGCAGAT TTAGTGGCGG CAGAATTAGG TTCACATCCG GTACTTGGGG ATCAGTTCCT GTGGCAGTCA CTGCATTGGG TGGTCGCAGG GCTTTATGAA GGCAAAGTCA CCAATGTGGG TATTCGCTTA CCAGCTGAGG CGTAA
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Protein sequence | MDADSINSFF LIGALLAAVS VLLSPVSSRL GIPILLIFLA VGILAGEDGP GGILFDDYST AYLVSNLALA IILLDGGMRT RVASFRVALW PALSLATFGV AITTSITGVM AAWLFDLHWL QGLLVGAIVG STDAAAVFSL LKGRSLNERV GATLEIESGS NDPMAVFLTV TLIAILGNVD AELSASFMLI SFIKQFGLGI FLGLGGGWLL WKLVNLSKLA EGLYSILVLS GGLMIYAASN KLGGSGILSI YLVGLFLGNK PTRGRHSILN VLDGMTWVSQ IGMFLVLGLL LTPSDLLDIW LPGLALAFGM ILFARPLAVW LSLLPFKSFS SRDRWFISWV GLRGAVPIIL AVFPMMAGLP GAQLYFNLAF FVVLVSLLVQ GASLTTAARL AKVELPPKPL PISRSGVEIY PSSEWEVFVY RLSENKWCIG EPLKRLSMPD GTRIAAVFRH NTLLHPSGST CLEAGDILCV LGQEKSLEAL SNLFSQAPET KEVPRFFGDF FIDTEVKLLD LAPIYGLELD EATGDMTVAD LVAAELGSHP VLGDQFLWQS LHWVVAGLYE GKVTNVGIRL PAEA
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