Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0880 |
Symbol | |
ID | 4256514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1003628 |
End bp | 1004455 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638121491 |
Product | hypothetical protein |
Protein accession | YP_736936 |
Protein GI | 114046386 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00269663 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAAGCA GATCTCCGTT CGAATCCTTT CAGTGGAAAA GCGATATTTT TAACTGTGAA AGCACTGATA TCGATAATTT TTATCTACAG CTTGAGCAGG AAATGTCCCG TTTGGGGATG GTTGAGAAAA AACTCGGTGA AGTCGGCAAG TACAGCGTTA GTCTGTATCA ATCTCCCGCC GCCAAATCTG GCTTACCTTC GTTATTGATC AGCGCAGGGT TTCACGGTGA AGAATCGGCA GGCCCTTGGG GCTTACTGCA CTTTTTAAGT GAGGCATCGG CCGATTTATT CGAAAGGGTG AATTTGAGCA TTCTGCCCCT GGTGAATCCA ACAGGCTTTA AGCGTGGTCA TCGATTTAAT AAGTTTGGTG AAAACCCTAA CCGTGGTTTC GTGTTTGAAA ATGGTAAACC TAAGGCCAAT GAAAGCACCT CGGTCGAAGG TAAACTGCTG TTAGACCATG CGCAGTTACT CATCGCGGCG AGCCGTGACG GTATTTTAAC CTGCCATGAG GACGTGCTGA GCCGTGATGC TTATGTGTAT TCCTTCGAGC CAAGCCAAGT GCCAGGACGT TTTAGTATCG ATTTACGCGA TACCTTAGGT GGCTATTTCC CTATCGCAGA AGATGGTGAA ATTGATGGTT GCCCAGTTAA AGATGGCCTC ATTTTCAACC ACTTCGATAC CTCATTTGAG GCGTGTTTAG TGCGTAGCGG CGCGCGTGTC GGTGCCTGTA CCGAAACACC AGCACTGCAA AACTTCGACC AACGCGTCTT GGCAAATAGC GCGGCAATGA CCCATTTCTT GGCCCTTTGC GCACCATTAT GCGATTGA
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Protein sequence | MVSRSPFESF QWKSDIFNCE STDIDNFYLQ LEQEMSRLGM VEKKLGEVGK YSVSLYQSPA AKSGLPSLLI SAGFHGEESA GPWGLLHFLS EASADLFERV NLSILPLVNP TGFKRGHRFN KFGENPNRGF VFENGKPKAN ESTSVEGKLL LDHAQLLIAA SRDGILTCHE DVLSRDAYVY SFEPSQVPGR FSIDLRDTLG GYFPIAEDGE IDGCPVKDGL IFNHFDTSFE ACLVRSGARV GACTETPALQ NFDQRVLANS AAMTHFLALC APLCD
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