Gene Shewmr7_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0880 
Symbol 
ID4256514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1003628 
End bp1004455 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content48% 
IMG OID638121491 
Producthypothetical protein 
Protein accessionYP_736936 
Protein GI114046386 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00269663 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAGCA GATCTCCGTT CGAATCCTTT CAGTGGAAAA GCGATATTTT TAACTGTGAA 
AGCACTGATA TCGATAATTT TTATCTACAG CTTGAGCAGG AAATGTCCCG TTTGGGGATG
GTTGAGAAAA AACTCGGTGA AGTCGGCAAG TACAGCGTTA GTCTGTATCA ATCTCCCGCC
GCCAAATCTG GCTTACCTTC GTTATTGATC AGCGCAGGGT TTCACGGTGA AGAATCGGCA
GGCCCTTGGG GCTTACTGCA CTTTTTAAGT GAGGCATCGG CCGATTTATT CGAAAGGGTG
AATTTGAGCA TTCTGCCCCT GGTGAATCCA ACAGGCTTTA AGCGTGGTCA TCGATTTAAT
AAGTTTGGTG AAAACCCTAA CCGTGGTTTC GTGTTTGAAA ATGGTAAACC TAAGGCCAAT
GAAAGCACCT CGGTCGAAGG TAAACTGCTG TTAGACCATG CGCAGTTACT CATCGCGGCG
AGCCGTGACG GTATTTTAAC CTGCCATGAG GACGTGCTGA GCCGTGATGC TTATGTGTAT
TCCTTCGAGC CAAGCCAAGT GCCAGGACGT TTTAGTATCG ATTTACGCGA TACCTTAGGT
GGCTATTTCC CTATCGCAGA AGATGGTGAA ATTGATGGTT GCCCAGTTAA AGATGGCCTC
ATTTTCAACC ACTTCGATAC CTCATTTGAG GCGTGTTTAG TGCGTAGCGG CGCGCGTGTC
GGTGCCTGTA CCGAAACACC AGCACTGCAA AACTTCGACC AACGCGTCTT GGCAAATAGC
GCGGCAATGA CCCATTTCTT GGCCCTTTGC GCACCATTAT GCGATTGA
 
Protein sequence
MVSRSPFESF QWKSDIFNCE STDIDNFYLQ LEQEMSRLGM VEKKLGEVGK YSVSLYQSPA 
AKSGLPSLLI SAGFHGEESA GPWGLLHFLS EASADLFERV NLSILPLVNP TGFKRGHRFN
KFGENPNRGF VFENGKPKAN ESTSVEGKLL LDHAQLLIAA SRDGILTCHE DVLSRDAYVY
SFEPSQVPGR FSIDLRDTLG GYFPIAEDGE IDGCPVKDGL IFNHFDTSFE ACLVRSGARV
GACTETPALQ NFDQRVLANS AAMTHFLALC APLCD