Gene Shewmr7_0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0871 
Symbol 
ID4256505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp992563 
End bp993351 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content51% 
IMG OID638121482 
Producthypothetical protein 
Protein accessionYP_736927 
Protein GI114046377 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGCA AAGGTAATAG TGTCACTTTT ATCAGTGCCT CAACCTCAAT TGAGGGTGAG 
ATTCAACTGG CGGGCACGGC ATTAGTTGCG GGTAAATTGC AGGGCAAGAT TGGCTCAGCG
GGACAAATTA AGATTGAACT CGGTGGTGAA ATTTCCGGTG AAATCAACTG TGATGAGCTG
CGGGTCTGCG GTTTATTTAG TGGCAGAGCC TGTTGTAATA AGTTGATTAT TACCAATTCT
GGTGTGGTTG AAGGTGAAGT AGCCAGCCAT CAGATGGAGA TTTACGAAGG CGGCCAGTTT
ATTGGTCAGC GGATTAAAGG CCCTGAGCTA GATACCTTGC CAGACATACT GCAAGCACTC
GCGCCAGCAG AACATCGCTC GGATACGCAG TTATATGCCA GTGAGAGCGG TTCATTAAGA
GGCGATAATC GCGCCATTCG CCCTTGGTTG TATGTTGCTG CGGCAACGGT CGTCATCGCC
TTAGGTTTTA GTTTTGGACC CGAACAATTG CGTGAGTGGT TACCGAATGT GAGTGATAAC
CCGCTTAGTG CTGAAGTGTC TCCCGTGGCT CAGGAGCAGG ATGTTCCATT ACTCACGCAA
CAAACGACTG CGCCAGATAC CGCGAATGCC GACAATAGCG CAGCCATATC CGAAGAGTCC
GAACCGCCGG CTCTGTCGCA GGATCCGGCG ATGGAAGATT TACAACAAAT GGAGCAAGCA
CATGCTCAGA TGGCTCAGGG TGAGAGTGGT GCTGCGCCCA CCAGTGAGAA TGCTGGCAAT
AAGCTCTGA
 
Protein sequence
MASKGNSVTF ISASTSIEGE IQLAGTALVA GKLQGKIGSA GQIKIELGGE ISGEINCDEL 
RVCGLFSGRA CCNKLIITNS GVVEGEVASH QMEIYEGGQF IGQRIKGPEL DTLPDILQAL
APAEHRSDTQ LYASESGSLR GDNRAIRPWL YVAAATVVIA LGFSFGPEQL REWLPNVSDN
PLSAEVSPVA QEQDVPLLTQ QTTAPDTANA DNSAAISEES EPPALSQDPA MEDLQQMEQA
HAQMAQGESG AAPTSENAGN KL