Gene Shewmr7_0865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0865 
Symbol 
ID4256499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp986598 
End bp987557 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content53% 
IMG OID638121476 
Producthypothetical protein 
Protein accessionYP_736921 
Protein GI114046371 
COG category[R] General function prediction only 
COG ID[COG3329] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGATA TTGTCATTGC GTTTTTCGCC TTAGGTTTAC TCGCCGGTTT AGTCAAATCC 
GACCTTAAGG TTCCCCCCGC CATCTACGAA ACCCTATCGA TTTTGTTAAT GCTGACCTTA
GGGCTCAAGG GCGGTATGGC GCTGCACGGT CATACCCAAA ACCTAGTGAT CACCGAACTG
GTTGCCGTGG TCGCCTTGGG CTTACTCATT CCCTTAGCGC TTTATCCCGT ACTCACACGC
TTAGTACGCA TTGGTCGCAC GGATGCCATT AGTATCGCCG CCCATTATGG CTCGGTGAGC
GCGGGCACCT TTGCCGTGGT TCTCGCCATG GTGGAAAAAT CAGGGATGAC ATTAAGACCC
GAAACCACCT TATACCTAGT GCTACTCGAA CTGCCTGCGA TTGTGATTAT GCTCTGGCTA
CACAGATACT TAAGTGCAAA ACAATCGGGG CCAGATACTG CGCCAACGGC CCATAAATCC
AGTGTGTTGC ACGAGGCGCT AACCAGTCGT GGCGTCGTGC TACTAGTAGG TGGTGTTGTG
ATAGGTTGGC TCTATGGCCC GACGGGACTA GCCCCTCTCA CACCTGTGCT GCTCGGCGGC
TTTAAAACCC TACTGGCACT GTTTTTACTG GAGATGGGCT TAGTCACGGC GAAAGTCTGT
TTACCACTGC CACTGCAACA ATGGCGTCTG TTAGTGTTTG CCGCCGTAAC GCCGTTTATT
TTGGCATGGT TAGGCATTGC TGTCGGTTTG TGGTTAGCGC TACCCGCAGG AAGTATTCTC
GTGCTTGCGG CCTTAAGTGC CAGCGCCTCC TATATCGCGG CACCAGCGGC CATTCGAGCC
GCGATTCCCG AGGCCAATAT CGGTTTGGCT ATGCTGGCCT CCCTTGGGAT TACCTTTCCG
GTAAACGTAT TAATTGGCTT GCCCTTGTAT CAGCACTGGG TGCTACAAAT CACCGCTTAA
 
Protein sequence
MPDIVIAFFA LGLLAGLVKS DLKVPPAIYE TLSILLMLTL GLKGGMALHG HTQNLVITEL 
VAVVALGLLI PLALYPVLTR LVRIGRTDAI SIAAHYGSVS AGTFAVVLAM VEKSGMTLRP
ETTLYLVLLE LPAIVIMLWL HRYLSAKQSG PDTAPTAHKS SVLHEALTSR GVVLLVGGVV
IGWLYGPTGL APLTPVLLGG FKTLLALFLL EMGLVTAKVC LPLPLQQWRL LVFAAVTPFI
LAWLGIAVGL WLALPAGSIL VLAALSASAS YIAAPAAIRA AIPEANIGLA MLASLGITFP
VNVLIGLPLY QHWVLQITA