Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0851 |
Symbol | |
ID | 4257112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 970789 |
End bp | 971337 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638121462 |
Product | SH3 domain-containing protein |
Protein accession | YP_736907 |
Protein GI | 114046357 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3103] SH3 domain protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000703568 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.217805 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTACTCT CCCCCAACCT GCTGGCCGAA GGCCAACCCC GCTATATCTC GGATAACGTG TTTCTTTATA TTCTCAATGG CCCGAGTACA GACTACCGTA TCTTAGGCTC AATTGAAGCG GGACAACCTA TTACCTTTTT GGGCGAAACC CAAGGCGATT ACTCGAAAAT TATCGACCAC AAGGGTCGCG AAGGTTGGGT ACCGACTAAC ATGATTAGCT CTACCCCGAG TTTTCGCGAG CAAGTATCGT CACTCACCAG TGAACTGGCT GAAGCCAAAG CTAAACTGGA CGAAGTGATG AATTCAACCG AAAACCATAC GGATGAATTG GCCGAGCTAA AAGCCAAGCT GACCGAAGCC GAAGCTATGC TCAGCAAAAC CACCCAAGAA CGTGACAGTT TGAAAGTGGC CGTGGATCGC AGCGCTCAAG AAGCGCAATT CGCCCTATGG CGTGAAGGTG GATTGATCGC CGCTGCGGGG TTAGTGCTCG GGGTAATTTT GGTGTATCTG CCGAGACCGC AGCGCCGCAA TAAAAAGCGT TGGATGTAA
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Protein sequence | MLLSPNLLAE GQPRYISDNV FLYILNGPST DYRILGSIEA GQPITFLGET QGDYSKIIDH KGREGWVPTN MISSTPSFRE QVSSLTSELA EAKAKLDEVM NSTENHTDEL AELKAKLTEA EAMLSKTTQE RDSLKVAVDR SAQEAQFALW REGGLIAAAG LVLGVILVYL PRPQRRNKKR WM
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