Gene Shewmr7_0851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0851 
Symbol 
ID4257112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp970789 
End bp971337 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content51% 
IMG OID638121462 
ProductSH3 domain-containing protein 
Protein accessionYP_736907 
Protein GI114046357 
COG category[T] Signal transduction mechanisms 
COG ID[COG3103] SH3 domain protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000703568 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.217805 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACTCT CCCCCAACCT GCTGGCCGAA GGCCAACCCC GCTATATCTC GGATAACGTG 
TTTCTTTATA TTCTCAATGG CCCGAGTACA GACTACCGTA TCTTAGGCTC AATTGAAGCG
GGACAACCTA TTACCTTTTT GGGCGAAACC CAAGGCGATT ACTCGAAAAT TATCGACCAC
AAGGGTCGCG AAGGTTGGGT ACCGACTAAC ATGATTAGCT CTACCCCGAG TTTTCGCGAG
CAAGTATCGT CACTCACCAG TGAACTGGCT GAAGCCAAAG CTAAACTGGA CGAAGTGATG
AATTCAACCG AAAACCATAC GGATGAATTG GCCGAGCTAA AAGCCAAGCT GACCGAAGCC
GAAGCTATGC TCAGCAAAAC CACCCAAGAA CGTGACAGTT TGAAAGTGGC CGTGGATCGC
AGCGCTCAAG AAGCGCAATT CGCCCTATGG CGTGAAGGTG GATTGATCGC CGCTGCGGGG
TTAGTGCTCG GGGTAATTTT GGTGTATCTG CCGAGACCGC AGCGCCGCAA TAAAAAGCGT
TGGATGTAA
 
Protein sequence
MLLSPNLLAE GQPRYISDNV FLYILNGPST DYRILGSIEA GQPITFLGET QGDYSKIIDH 
KGREGWVPTN MISSTPSFRE QVSSLTSELA EAKAKLDEVM NSTENHTDEL AELKAKLTEA
EAMLSKTTQE RDSLKVAVDR SAQEAQFALW REGGLIAAAG LVLGVILVYL PRPQRRNKKR
WM