Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0823 |
Symbol | |
ID | 4256859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 932083 |
End bp | 933021 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638121434 |
Product | ABC transporter related |
Protein accession | YP_736879 |
Protein GI | 114046329 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAATC ATGCCCATGC TCTCGTACTC GAGGGGCTAA AAAAAACCTA CAAAGGCGGT GTTGAGGCGG TAAAGGGGAT TAGCCTTACC GTTGAACAGG GAGACTTTTT CGCCCTGTTA GGCCCGAACG GCGCGGGTAA GTCGACCACT ATTGGCATCA TCAGCTCCTT GGTGCAGAAA ACCGCGGGCT CTGTTCAAGT ATTTGATTTT GATATCGATA AACAGCTTGA AGAAGCCAAG CTGCACATAG GTTTAGTGCC ACAGGAATTT AACTTCAACC AGTTTGAAAC GGTACTGCAA ATCGTCGTGA ATCAGGCGGG GTATTATGGT GTGCCTAAGG CCGTGGCTCT TGAGCGAGCC CAAAAATACT TAAGCCAGCT GGATTTGTGG GATAAGCGCA ATAGCCAATC TCGTACACTC TCTGGGGGAA TGAAGCGGCG ATTAATGATT GCTCGCGCCC TGATGCACGA ACCTAAGTTA CTGATCTTAG ATGAGCCTAC TGCGGGGGTT GATATTGAGC TGCGCCGCTC AATGTGGGAA TTCCTCAAGC AAATCAATCA GCAGGGCGTG ACGATCATTC TGACTACCCA CTACCTTGAA GAGGCCGAAA TGCTGTGTCG CAATATCGGC ATTATCGATA AGGGCGTGCT GGTGGAGTGC ACGAGTATGA AGGCCTTGCT GAGTAAACTG AATCTCGAAA CCTTTATTCT CGACCTGCGC CGCGATATCG ATGTCGCTCC CACACTCGAT GGTATGGTGT GCCGTTTAAT CGATCCCCAT ACCTTAGAAG TGGACGTGGC GAAGGAGCAT AATCTCAATG ATGTGTTTAC GCAGTTAACC GCTGCCAATG TAGAAGTGTT GTCTATGCGC AACAAATCCA ATCGTTTAGA AGAACTCTTT GTCGAGTTAG TGAAGAAAAC TCAAGGAGCT AAGGCATGA
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Protein sequence | MANHAHALVL EGLKKTYKGG VEAVKGISLT VEQGDFFALL GPNGAGKSTT IGIISSLVQK TAGSVQVFDF DIDKQLEEAK LHIGLVPQEF NFNQFETVLQ IVVNQAGYYG VPKAVALERA QKYLSQLDLW DKRNSQSRTL SGGMKRRLMI ARALMHEPKL LILDEPTAGV DIELRRSMWE FLKQINQQGV TIILTTHYLE EAEMLCRNIG IIDKGVLVEC TSMKALLSKL NLETFILDLR RDIDVAPTLD GMVCRLIDPH TLEVDVAKEH NLNDVFTQLT AANVEVLSMR NKSNRLEELF VELVKKTQGA KA
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