| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0778 |
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| Symbol | |
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| ID | 4257215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 887270 |
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| End bp | 888958 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638121390 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_736835 |
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| Protein GI | 114046285 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0299274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATA ATAAACGCCC CCTCTATCTT CCGTTTGCAG GACCTGCCAT TCTTGAAGCG
CCATTGATTA ACAAGGGCAG TGCATTTTCG GAAGAAGAGC GTATTTTCTT TAACCTCGAA
GGCTTAGTGC CCTATGCCAT TGAAACTATT GAAGAACAGG CTTCCCGCGC CTACGATCAG
TTCAGAAGTT TCAATAACGA TCTCGATAAG CACATCTATC TGCGCAACAT TCAAGACACC
AACGAGACCC TGTTTTATCG TTTAGTGCAA AACCACATCA GCGAAATGAT GCCAATTATC
TACACCCCGA CGGTAGGTTT GGCCTGTGAG CGCTTCTCGA AAAACTATCG CCGTAACCGT
GGTCTGTTCA TCTCCTACCC GAATAAAGAC AGAATCGACG ACATCCTCAA TAACTCGACT
CGCCAAAAAG TAAAAATCAT CGTTGTGACC GACGGTGAGC GCATCTTAGG CTTAGGCGAC
CAAGGTATTG GCGGCATGGG GATCCCTATA GGTAAATTGT CGCTCTACAC CAGCTGTGGT
GGGATCAGCC CCGCATACAC ACTGCCCATC ACCTTAGACG TAGGGACCGA CAATCCACAG
TTGCTGGAAG ACCCTATGTA CATGGGTTGG CGTCATCCAC GCATTGGCGG CGAAGAGTAT
GCCGAGTTTA TCGAAGCCTT TATGCAAGCC GTGCATGTAC GTTGGCCAGA CACCCTGATC
CAATTCGAAG ACTTTGCCCA AAAGAATGCG ATGCCAATCC TTGAGCGTTA TAAGGAAAGA
TACTGCTGCT TTAACGATGA CATTCAAGGC ACTGCCGCCG TCACTGTTGG CTCATTACTC
GCCGCCTGTA AGGCCGCGGG CACTGAACTG AACAAACAAC GGGTTGCCTT CTTGGGTGCT
GGTAGCGCAG GTTGCGGTAT TGCCGAAGCC ATTGTCGCGC AAATGGTGTC AGAGGGTATC
AGCGACGAGC AAGCACGCAG CCAAGTCTGT ATGGTTGACC GCTGGGGCCT GCTGCTCGAC
AACATGCCGA ACCTGTTGCC ATTCCAGCAA AAACTGGCTC AAAAATGTGC CGATATCAGC
CACTGGAATA ACTTCAGCGA CAATATTTCA CTGCTCGATG TGGTCAATAA CGTTAAACCA
ACGGTGTTGA TTGGCGTATC GGGCGCACCG GGTCTGTTTA CCGAAGAAAT TGTTCGTGCA
ATGCATAGCC ACTGCGAACG TCCAATTATC TTCCCACTGT CAAACCCCAC CAGCCGTGTT
GAAGCGACGC CAAAAGACAT TCTGCACTGG ACGTCTGGCC AAGCCTTAGT GGCAACGGGT
AGCCCGTTTG AACCTGTTGT TGTCGATGGC GAAACCTATG AAATCGCGCA ATGTAACAAC
AGCTTTATCT TCCCTGGTAT TGGTTTAGGT GTACTCGCCT CGGGTGCTCG CCATGTATCC
GATGCGATGT TAATGGCATC GAGCCGTGCG CTCGCCGAAT GCTCACCGTT AGCCATTAAT
GGCTCAGGAC CACTCCTGCC AAAACTGGAA GATATTCACT CAGTGAGTAA GCATATTGCG
TTTGCCGTCG GTAAAGTGGC GATTGAACAA GGACTATCCT TGCCTGCGAG TGATGAGCTG
CTGATGCAAT CTATCGAAGA TAATTTCTGG AAGCCAGAGT ACCGCCGTTA TAAGCGTACG
TCTTTCTAA
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| Protein sequence | MDDNKRPLYL PFAGPAILEA PLINKGSAFS EEERIFFNLE GLVPYAIETI EEQASRAYDQ
FRSFNNDLDK HIYLRNIQDT NETLFYRLVQ NHISEMMPII YTPTVGLACE RFSKNYRRNR
GLFISYPNKD RIDDILNNST RQKVKIIVVT DGERILGLGD QGIGGMGIPI GKLSLYTSCG
GISPAYTLPI TLDVGTDNPQ LLEDPMYMGW RHPRIGGEEY AEFIEAFMQA VHVRWPDTLI
QFEDFAQKNA MPILERYKER YCCFNDDIQG TAAVTVGSLL AACKAAGTEL NKQRVAFLGA
GSAGCGIAEA IVAQMVSEGI SDEQARSQVC MVDRWGLLLD NMPNLLPFQQ KLAQKCADIS
HWNNFSDNIS LLDVVNNVKP TVLIGVSGAP GLFTEEIVRA MHSHCERPII FPLSNPTSRV
EATPKDILHW TSGQALVATG SPFEPVVVDG ETYEIAQCNN SFIFPGIGLG VLASGARHVS
DAMLMASSRA LAECSPLAIN GSGPLLPKLE DIHSVSKHIA FAVGKVAIEQ GLSLPASDEL
LMQSIEDNFW KPEYRRYKRT SF
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