Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0719 |
Symbol | |
ID | 4255161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 831034 |
End bp | 832080 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638121330 |
Product | PBSX family phage portal protein |
Protein accession | YP_736776 |
Protein GI | 114046226 |
COG category | [R] General function prediction only |
COG ID | [COG5518] Bacteriophage capsid portal protein |
TIGRFAM ID | [TIGR01540] phage portal protein, PBSX family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0253074 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGATG CAACATTAAC AGCGGCGAAT GACGACGGCA CCAACGTGGC CGCCAATGCG ACGGCCAGTG AGCCGAAAAC GGTGGTGTTT AGCATGCCTG AGCAAGTCAT GCCGAATATG TGGCTGACTG ACTATGATTC GCTGTTTTAC AACGAAAATG ATGGCTATTG GGAGCCGCCC GTGGATCGGC AATTGCTGGC GAACCTCACC CGCCGTAATG CGCAGCACGG CGGCATTGTG CAAAGTCGGG CGAATATGGC GGTAGCGCGT TATTTGTCTG GCGGGATGAG CGCGCAGGAA ATGGGGGCAG GCTTTTTAAA CTGTGTTCAA TTTGGTGATG TGGCGCTACT TAAGATCCGC AATGGTTTTG GGCAAGTGGT GCGGTTGTTC CCGCTACCGA GTTACCGCAC GCGTGTAGCT GGTGATGGTG GCGCAGTGGT GCTAGAGCGG CAAAACACGT TTAAGCGTTA TAAAGCCAAA GACATTATTT GGGTGAAAAT TTATGACACA GTGCAACAGA TTTATGGCTG CCCTGATTAT TTGGGCGGGT TACAGTCATT ACTGTTGAAT GAAGATTCAA CGCTGTTCCG GCGCAAATAC TACATTAACG GCGCGCATAT GGGCTTTATC TTGTATACCA CGGACCCGAA TTTAGACGCT GAGGTTGAAA AAGAAATTAA GGAAAAAATT CAAGCATCTA AAGGCGTTGG TAACTTTAGT TCTCTGTTTG TTAATATTCC CAACGGTAAA GAAAAAGGTG TTCAGATCAT CCCCGTGGGT AACTTTGAAT CGAAAGACGA GTTCGGCAAC GTTAAGACTA TTACCGCTCA AGATGTGTTT AACGCGCATC GCTTCCCCGC TGGCCTTGGC GGGATGATCC CCACAAACAC GGCAGGCCTT GGTGACCCGC TCAAGTACGA TGAGGTGTAT TTTAAGAGTG AAACGCGGCC TCTTATTAAG ATGTTTGTCG ATGCCGTTAA CCGCGATCCC GAGATTAGCC GCGCGCTAAA ACTGGTGTTT GATATGGAGT TTGGCAAGGC AGCTTAG
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Protein sequence | MGDATLTAAN DDGTNVAANA TASEPKTVVF SMPEQVMPNM WLTDYDSLFY NENDGYWEPP VDRQLLANLT RRNAQHGGIV QSRANMAVAR YLSGGMSAQE MGAGFLNCVQ FGDVALLKIR NGFGQVVRLF PLPSYRTRVA GDGGAVVLER QNTFKRYKAK DIIWVKIYDT VQQIYGCPDY LGGLQSLLLN EDSTLFRRKY YINGAHMGFI LYTTDPNLDA EVEKEIKEKI QASKGVGNFS SLFVNIPNGK EKGVQIIPVG NFESKDEFGN VKTITAQDVF NAHRFPAGLG GMIPTNTAGL GDPLKYDEVY FKSETRPLIK MFVDAVNRDP EISRALKLVF DMEFGKAA
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