| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0684 |
|---|
| Symbol | |
|---|
| ID | 4254995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 804685 |
|---|
| End bp | 805425 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638121297 |
|---|
| Product | 23S rRNA (guanosine-2'-O-)-methyltransferase |
|---|
| Protein accession | YP_736743 |
|---|
| Protein GI | 114046193 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000107401 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000276778 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAC AAGATATTAT TTTTGGGATC CACGCGGTTG AAGCGCTGTT AAAACACAGT
CCAGAACGCA TTATCGAGCT TTGGTTGTTG CAGGGCCGTG AAGATGAGCG CTTAACCCCG
CTGATCCGCC AGGCTAAATC TTTTGGGACT AGTATCCAAG TCACTTCACG CAAAGTGCTG
GACGATAAAG CCGAAAGCTC TCAGCATCAA GGCATTGTCG CCCGTGTTAA AGCGGCCAAG
ATCTTGGCTG AGCATGATTT AGATGAGCTG CTAGCTAAGA CTGACTTACC GTTTTTATTG
ATTTTAGATG GCGTTACCGA TCCGCATAAC CTAGGTGCCT GCTTACGTAA CGCTGATGCA
GCGGGTGTGC AGGGCATTAT TGTGCCTAAG GACAACTCTG TAGGTGTAAC GGCTGTCGTG
AGCAAAGTAG CCTGCGGCGC CGCCGAAACT GTGCCTTTAT TCCAAGTGAC TAACCTTGCG
CGTACTATGC GTCATTTGCA GGAAAAGGGC GTGTGGATTG TCGGCACGGC GGGCGAAGCG
GATTGCGAGC TATATCAAGC CGATCTTAAA GGACCTCTGG CGATTGCCAT GGGTGCCGAA
GGCAAAGGCT TACGCCGCCT AAGTCGTGAA TGTTGCGATA CTCTAGTGTC TATTCCGATG
GCGGGGAGCG TTTCTAGCTT AAACGTGTCG GTCGCAACGG GCATTTGCCT ATTTGAAGCC
GTGCGTCAGC GCCGAAGCTA A
|
|---|
| Protein sequence | MKKQDIIFGI HAVEALLKHS PERIIELWLL QGREDERLTP LIRQAKSFGT SIQVTSRKVL
DDKAESSQHQ GIVARVKAAK ILAEHDLDEL LAKTDLPFLL ILDGVTDPHN LGACLRNADA
AGVQGIIVPK DNSVGVTAVV SKVACGAAET VPLFQVTNLA RTMRHLQEKG VWIVGTAGEA
DCELYQADLK GPLAIAMGAE GKGLRRLSRE CCDTLVSIPM AGSVSSLNVS VATGICLFEA
VRQRRS
|
|---|
| |