Gene Shewmr7_0666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0666 
Symbol 
ID4256197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp784750 
End bp785676 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content51% 
IMG OID638121280 
ProductPHB depolymerase family esterase 
Protein accessionYP_736726 
Protein GI114046176 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3509] Poly(3-hydroxybutyrate) depolymerase 
TIGRFAM ID[TIGR01840] esterase, PHB depolymerase family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.19814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAT TGACACTCAT CGCCACTTGC CTCAGCGCAC TGTTATTCAC CCCCGCCTAT 
GCCCAGAGTG AGTATCAGGC ATTTAGCGAA TTTGGCGCCA ATCCCGGTGA GTTAACCGCC
TCCTATTTAT CGCCCGAAAG CCCAGGCCAA GATGCGCTCG TAGTGCTGCT GCACGGCTGT
GTGCAGGATG GGGTCGAACT GGCCAACAAT AGCGGTTTAA CCGCCCTCGC CCAAGAGAAA
AAGTTTAGCT TACTGGTGCC ACAACAGAGT TTTGAGAACA ATGTAAAGCG TTGTTATAAC
TGGTTTTCAG CGCAGGATAC TCAGGTGGAT AGCGGCGAGA TGCTATCGCT GAAAAACATG
ATAGCCAAAG CCCAATCCCA ATCCGGCGCA AAACGCGTCT ATGTGATTGG CCTGTCCGCC
GGTGGCGCCA TGGCCAGCGC CGCACTGGTG AATTATCCCG ATTTATTCAC CGCTGGCGCG
GTGATCGCAG GCCTGCCTTA CCCCTGCGCC GATAACCTGA CCAAAGCCAT TTCCTGCATG
AAAAAGGGCC CTGCAGAGTC TGTTGAAGAA TTAGTGAGTT TTGCCAAACA GGTGCATCCG
AACCAACAAC ACTGGCCCGC CTTAACCGTG TGGACCGGGC AAAATGATGT GGTGGTGAAT
CCTGAAAATG CCAAACAACT CTCGGCACAG TGGGTCGCAC TGACCCAAGC GAATAAAACA
CCAAGAGTCG AGCAATATGC CGACTATAGT GTTAGCACTT GGTCCGATAC GAGTGGCAAT
AACCTTATTT CGTTAGTCGA AATAAATAAT ATGGGCCATG GCATTGCCGT TAATCCGGAA
ATTAAAAACG GCGGCAACAC GGGAGACTTT TTACTAAAAG CACCTATCAG CAGCATGCCA
GAAATAATCA ATCTTTGGGG AATATAG
 
Protein sequence
MRKLTLIATC LSALLFTPAY AQSEYQAFSE FGANPGELTA SYLSPESPGQ DALVVLLHGC 
VQDGVELANN SGLTALAQEK KFSLLVPQQS FENNVKRCYN WFSAQDTQVD SGEMLSLKNM
IAKAQSQSGA KRVYVIGLSA GGAMASAALV NYPDLFTAGA VIAGLPYPCA DNLTKAISCM
KKGPAESVEE LVSFAKQVHP NQQHWPALTV WTGQNDVVVN PENAKQLSAQ WVALTQANKT
PRVEQYADYS VSTWSDTSGN NLISLVEINN MGHGIAVNPE IKNGGNTGDF LLKAPISSMP
EIINLWGI