Gene Shewmr7_0630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0630 
Symbol 
ID4255827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp735654 
End bp737318 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content51% 
IMG OID638121244 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_736690 
Protein GI114046140 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAATT TCAGTTTACG TAACAAATTG CTCCTACTCG CACTGTTCCC GTTGATTCTG 
ACCCTCATAG TGCTGATGAC AGTTTCCTAC CATGTCGAGC AATCGGCGCT TGACGATGAG
GTCACCACAT TTAGAGAAAA GTTAATCGGT GAGCGTAAAA CCCAAATCAA GGAAGCCACC
CAAATCGCCG CAGGCATAGT GCAATACCAG CTATCGTTAA AAGAACAGGG CAATGTTAAC
CAAGCCCTAC GTGATATTCG CTTTGGCAGT TCGGGCTACT TCTTTATTTA CGATTCCCAA
GGTAAAAACC TGTTCCATGC GGTCATGCCC AACCTCGAGG GGCAGAATAA AATCGATATG
ACCGACCCCC GCGGCACCAA GATCATTGTC GGCCTACTCA ATGCCGCCAA AAACGGTGAC
GGTAATTTCT CGTTCTATTT CCAAAAACCC AATACCAACG AGCAAATCGA AAAAATCGGC
TACTCCATGA TGATCCCAGG CACTGATTGG ATGCTCGGCA CTGGCGCCTA TATCGACGAT
ATCGATGCCG TGGTTGAGGA TTACCGCGCC ACAGTCACCG AGCAGATGAT CGATAAGTCC
TACGCGATTT TATTGATTGC ACTGCTATTA GCGGCCATTA CCGCCGCCGT GATCTTAGTG
ACCGCCCAGC GCATGGTCAC ACCGATTAAA AACATGGCCG ATAACTTAAA CGATATCGCC
AAAGGCGAAG GCGATTTAAC CAAGCGCCTT GCGGTAAAGG GCGACGATGA AATTGCTCAA
CTCGGCCGCT CCTTCAACCT GTTTGTCGAT AAACTGCAAA CCATTATAGG CGATGTGGCC
CATGCCACCG CTAAGGTCAA AACCGCAGCC AATGCGATTC ATGACCAAAC CAAGGTGATG
TCGCGCCAAC TTATCAGCCA TAACAATGAG ACTGATCAAG TGGTTACCGC CATTACTGAG
ATGTCTGCCA CCGCGAGTGA AGTGGCGCAA AACACCACCC AAGTGGCCGA AGCGACCCAC
GCCGCCACGG GCGATGTGGC CAATGCCCAG CGCTGCGTCG ATGCATCGTT AGAGGAGATT
TCGGCGCTGA TGGCGCAAAT CAACAATGCC GCCAGCAATA TTCAATCCTT GAGTGAACAG
TCGCAAAAAA TTAATAGCGT GCTCTCGGTG ATCGGCGGTA TTGCCGAGCA AACCAACCTG
TTGGCATTAA ACGCCGCGAT TGAAGCCGCT CGAGCCGGTG AGCAGGGTCG CGGCTTTGCC
GTAGTGGCCG ATGAGGTACG CAACTTAGCC AGCCGCACTC AATCAAGCAC ATTAGAAATC
AACGAGATGC TTTCTGAGCT GCACAAGCTG GTGAGCTTAG CGGTTAAAAC CATGGAAGAG
AGTCAACAGA GTTGTATACG CTCGGTGGAT TCGTCCCGCG CCATCTCCGA AAGCTTAGGC
TCAGTGACCT CGGCAGTAAC CGCCATCAAC GATATGAGTA CCCAAATTGC CACGGCGGCG
ACCGAGCAAA GCTCAGTGAC CGAAGAAATC AACCGCAATG TGTTTGCTAT TCAAGAGATT
GTGAATGAGC TGCTGCATTC CAGCGAAGAG GCGGCGAGCG TGAGCCAAAC CGTGTCGCAG
GAAGGACTAA ACCTCGGCAA ACTCGTCGGC CAATTTAGGA TTTAA
 
Protein sequence
MSNFSLRNKL LLLALFPLIL TLIVLMTVSY HVEQSALDDE VTTFREKLIG ERKTQIKEAT 
QIAAGIVQYQ LSLKEQGNVN QALRDIRFGS SGYFFIYDSQ GKNLFHAVMP NLEGQNKIDM
TDPRGTKIIV GLLNAAKNGD GNFSFYFQKP NTNEQIEKIG YSMMIPGTDW MLGTGAYIDD
IDAVVEDYRA TVTEQMIDKS YAILLIALLL AAITAAVILV TAQRMVTPIK NMADNLNDIA
KGEGDLTKRL AVKGDDEIAQ LGRSFNLFVD KLQTIIGDVA HATAKVKTAA NAIHDQTKVM
SRQLISHNNE TDQVVTAITE MSATASEVAQ NTTQVAEATH AATGDVANAQ RCVDASLEEI
SALMAQINNA ASNIQSLSEQ SQKINSVLSV IGGIAEQTNL LALNAAIEAA RAGEQGRGFA
VVADEVRNLA SRTQSSTLEI NEMLSELHKL VSLAVKTMEE SQQSCIRSVD SSRAISESLG
SVTSAVTAIN DMSTQIATAA TEQSSVTEEI NRNVFAIQEI VNELLHSSEE AASVSQTVSQ
EGLNLGKLVG QFRI