Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0606 |
Symbol | |
ID | 4257289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 707212 |
End bp | 708219 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638121220 |
Product | extracellular solute-binding protein |
Protein accession | YP_736666 |
Protein GI | 114046116 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATGGG TAACTTGTGC CGCTTTACTT GGGTTAATGT CGGTTGCGAA TTCGGCTAGC GCTGATGAGA CATTAACCGT TTACTCCTAC CGTCAGCCCT TTCTGGTTGA GCCTATTCTG AAGCGCTTTA CGGAGGAAAC GGGCATTGGG GTAAATTTTG TCTTTGCGAA AGACGGTATT GCCGAGCGTA TCGCCCGTGA AGGCCGTTTA TCCCCTGCGG ATTTAGTGTT AACTTCAGAT TTCTCTCGCT TGGTTGAATT GGTCGACAAA GACCTGACTT CTTCCGTGAA AAGTGAACAG CTCAATAGCA ATATCCCCGC GCAATACCGC GATCCCGATG GACAATGGTA TGCCTTAACG ATGCGTGTAC GTAATCTCTA TACGGCAAAA GATCGTCTCG GCCCACAAGC GATCAGCTAC GAAGAGTTGG CCGATCCTAA GTACAAAGGC AAGATCTGTA CGCGCAGTGG CAAGCATCCT TATAACATCG CCTTAGTGGC GTCTATGATC GCCCACCACG GTGAGGCCGA CACTAAGACT TGGTTGCAAG GTGTGAAAAC CAACTTAGCA CGCAAGCCCC AAGGTAACGA TAGAGCGCAG GTGAAGGCGG TTAAAGAGGG CTTGTGTGAT ATCGCCATTG GTAACAGCTA CTACTATGGC AATATGCTGC AAGATCCAGA TCAAAAGAGC TGGGCAGAGG CCGTAGTGAT TAATTTCCCT AATCAGGCTG ACCGCGGTGC CCATGTGAAC GTTTCTGGTA TGGTGCTCAC TCGCCATGCG CCAAATAAAG ACAATGCTAT CAAGTTGATG GAGTTCCTGT CTGCGGATGT GGCACAAAAA GCCTATGCCG AAGTGAACAT GGAGTATCCG GTGAAAGCCG ATGTCGCGCC TTCAACCTTG GTTGCCTCTT GGGGCGAGTT TAAATCCGAC CAATTACCGA TTTTCAAGCT GGCGGAATAC CACCAAGCGG CGGTGAAATT GTTAGATGAA GTTCAGTTCG ATCTCTAG
|
Protein sequence | MKWVTCAALL GLMSVANSAS ADETLTVYSY RQPFLVEPIL KRFTEETGIG VNFVFAKDGI AERIAREGRL SPADLVLTSD FSRLVELVDK DLTSSVKSEQ LNSNIPAQYR DPDGQWYALT MRVRNLYTAK DRLGPQAISY EELADPKYKG KICTRSGKHP YNIALVASMI AHHGEADTKT WLQGVKTNLA RKPQGNDRAQ VKAVKEGLCD IAIGNSYYYG NMLQDPDQKS WAEAVVINFP NQADRGAHVN VSGMVLTRHA PNKDNAIKLM EFLSADVAQK AYAEVNMEYP VKADVAPSTL VASWGEFKSD QLPIFKLAEY HQAAVKLLDE VQFDL
|
| |