Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0597 |
Symbol | |
ID | 4254962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 699594 |
End bp | 701384 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638121211 |
Product | ABC transporter related |
Protein accession | YP_736657 |
Protein GI | 114046107 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCCAA CACTGTATTT TGAAGGTCCC ATCGATAAGC TCAATTGGCA CGTAGTTAAG TTGCTCTGGC CTTATTTGCT CGAGTACAAG GGTCGAGTGG CATTGGCTAT GTCTTGTCTT ATCGTCGCTA AGCTTGCCAG CGTGGGCTTG CCCTTTATTC TTAAAGACTT AGTCGATACT TTGGATGCCA ATAAAACCGC GCAGGCCTTG AGTGTGCCCA TCGGGTTAGT ATTAGCCTAT GGCGCGGTGC GACTGTTAAC TGTAATCACG GGTGAAATCC GCGACACACT CTTTGGCCGT GTCACTGAGC GGGCCATTCG CCGTTTGGGC TTGGCGGTGT TCGATCACTT ACATCGACTC GATTTGGATT TTCACTTAGA GCGGCGCACG GGCGGCTTGT CGAGGGATAT TGAGCGCGGC ACCAGTGGCG TGAGCTTCTT GATGCGCTTT ATGGTGTTTA ACATAGTGCC GACCCTACTC GAAATCGCCA TGGTTATTGG TATTTTCTTT TTTAATTATG GCATTGCCTT CGCCGCGATC ACTTTTACCT CTGTGATAGC CTACATTTGG TTTTCGGTGG TGGCGACAGA GTGGCGCACC GAATACGTCC GCGATGCGGC CAAAGCCGAC TCCCTCTCCA ATACCCGCGC CATCGACAGT CTGCTCAACT ATGAAACCGT GAAGTATTTT AATAATGAAA AGTATGAATC GGATCGATAT GACCAAGCTT TAGATCAATG GGAAGTGGCT AAACGTAAGA ATCGTTTATC GCTATTTGCC CTCAACGGTG GGCAGGCGCT GATTATCGCA TTGGCGATGA CGGCGATGAT GGCGTTGGCC GCCTATAAAG TGACCAATAA TGAGATGACC TTAGGTGACT TTGTATTGAT TAATGCCTTT ATGATGCAGC TCTTTATGCC GCTCAACTTT TTGGGATTTG TCTACCGTGA AATCCGTGGC GCCTTAGCCA ATATCGAGCG GATGTTCAGT CTGCTCGATA AGCACCCTCG TATAGTGGAC AAACCCGATG CCTTAGACTT TGAGCCTAAG CGCGGTGAGC TTAGTTTTGA ACATGTGAGT TTTAGCTACG ATGACAGGCC CATATTGCGC AACGTCAGCT TTAAGGTGGC GGCGGGGGAA AAAGTTGCCG TCGTTGGAGA TAGTGGCGCC GGAAAATCAA CACTCATCAA GTTACTGTTC CGTTTTTACG ATGTGGAGCA AGGGCGCATT TTGATTGACG GGCAAGATAT TCGTCACTTA ACCCAGGATG CACTGCGCCG TGCTATTGCC ATAGTGCCGC AGGATACTGT GTTATTTAAT GATTCCTTAG TGGAGAACAT TCGTTATGGC CGCCCCGATG CGACGGATGA AGAAGTGCGC CATGCCATCA AACTCGCACA TTTAGAGCAT TTTATCGCGT CGCTCTCCCA AGGTTGGGAT ACCAAAGTGG GTGAGCGGGG CTTAAAGCTT TCGGGCGGGG AGAAACAGCG TGTGGCCATT GCGCGGGCGA TTTTAAAAGG ATCCCCAGTG TTAGTCTTTG ATGAGGCTAC ATCCTCCCTC GACAGCCGCT CCGAACAGGC GATTCTGTCG GCACTGCGTG AGGTCGCGAA AGGGCATACC AGCTTAGTCG TGGCGCATAG GTTATCGACT ATAGTCGACG CCGATCAGAT CGTGGTCTTA AGCCAAGGGG AAATTGTCGA GCAGGGGAAT CATCAGTCTT TACTGACTCA GGATGGTTTA TACGCTAAGT TGTGGCGCAT ACAAAATGAG CAACAACAGC TTTCGGTGTA A
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Protein sequence | MRPTLYFEGP IDKLNWHVVK LLWPYLLEYK GRVALAMSCL IVAKLASVGL PFILKDLVDT LDANKTAQAL SVPIGLVLAY GAVRLLTVIT GEIRDTLFGR VTERAIRRLG LAVFDHLHRL DLDFHLERRT GGLSRDIERG TSGVSFLMRF MVFNIVPTLL EIAMVIGIFF FNYGIAFAAI TFTSVIAYIW FSVVATEWRT EYVRDAAKAD SLSNTRAIDS LLNYETVKYF NNEKYESDRY DQALDQWEVA KRKNRLSLFA LNGGQALIIA LAMTAMMALA AYKVTNNEMT LGDFVLINAF MMQLFMPLNF LGFVYREIRG ALANIERMFS LLDKHPRIVD KPDALDFEPK RGELSFEHVS FSYDDRPILR NVSFKVAAGE KVAVVGDSGA GKSTLIKLLF RFYDVEQGRI LIDGQDIRHL TQDALRRAIA IVPQDTVLFN DSLVENIRYG RPDATDEEVR HAIKLAHLEH FIASLSQGWD TKVGERGLKL SGGEKQRVAI ARAILKGSPV LVFDEATSSL DSRSEQAILS ALREVAKGHT SLVVAHRLST IVDADQIVVL SQGEIVEQGN HQSLLTQDGL YAKLWRIQNE QQQLSV
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