Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0587 |
Symbol | |
ID | 4254952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 690776 |
End bp | 691486 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638121201 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_736647 |
Protein GI | 114046097 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGTAT CCCAGTTAGT CACCTTAGCC GTTATTCACT GCGTAGCCTT AGTCAGCCCT GGGCCGGATT TTGCCATTAT GGTGAAGATT GCTACGTCGC AGCCGAGAAA CACCGCAATC GCCACGGCGG CTGGGATATC GGTAGCGATT TTAGCCCATA CCATTTTGAG TTTAACCGGC GTCAGCTTAG TGATTAAAAG CTCCCATAGC TTGTATCTGT TAGTGCAATT GCTGGGCGCT TCATATTTGG CATGGATGGG ATTTGGCGCG CTTAAGGCTG CGGTCGCCTT TTTCAGTAAA CCTAAAACCA TATTGAACGG CGAGGGCGCT GAGCCCACTG GATTTACATC TACCTCTACC TCGGAAAACA GCCTTGATAT GCCTACGGCG GGCGCGGTAA ACGCCTTATC ACCTAAACAG GGGTTTATGC GGGGGCTTTA TACCAATTTA TTGAATCCTA AAGCCTTAGT GTTTTTCTTA ACCTTATTCT CTGCCCTGAT CACCCCGAGC GTGACTCCGG TGACTAAATT CGCCGCTGCG CTGATGTTAT TTGTGTTGTC ATTGCTCTGG TTTGGCTTTC TGGCACTGAT GCTCTCTAAA GCCAAGGTGC AGCAAAAGCT GCAACGACTC ACACCTATCA TCGATGGGGT GATTGGGTTG ATCTTTATGT CGGTGGCGGT AGCGATAGTG TCTAATTTAC TGCTGGCCTG A
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Protein sequence | MDVSQLVTLA VIHCVALVSP GPDFAIMVKI ATSQPRNTAI ATAAGISVAI LAHTILSLTG VSLVIKSSHS LYLLVQLLGA SYLAWMGFGA LKAAVAFFSK PKTILNGEGA EPTGFTSTST SENSLDMPTA GAVNALSPKQ GFMRGLYTNL LNPKALVFFL TLFSALITPS VTPVTKFAAA LMLFVLSLLW FGFLALMLSK AKVQQKLQRL TPIIDGVIGL IFMSVAVAIV SNLLLA
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