| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0528 |
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| Symbol | |
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| ID | 4258332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 604239 |
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| End bp | 606107 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638121142 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_736588 |
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| Protein GI | 114046038 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCCA GTGAAAGAAC TTTCCGTGAA CTCGGCTTGT CCGAGAATTT GTTGCGTGCT
CTTGACGAGC TAGGTTACGA AAAACCAACG CCAATCCAAT CAGCCAGTAT TGACCCATTA
ATGGCTGGCA AAGATATTTT AGGTCAGGCA CAAACAGGTA CAGGTAAAAC TGGCGCCTTC
GCCCTGCCTC TGCTCAACAA AGTGACCAGC CAAGCTGTTC CACAAATCCT AGTATTAGCG
CCAACCCGCG AATTAGCGGT GCAAGTAGCA GAAGCTTTCA GCAGCTACGC GAAATTTATG
AAAGGTTTCC ATGTACTGCC AATCTATGGC GGTCAGAGCA TGCATCAGCA ATTAAACGCC
CTGAAGCGTG GCCCACAGGT TATCGTGGGT ACCCCTGGCC GTGTTATGGA CCATATGCGC
CGTGGCACCT TAAAGCTGGA AACCCTGCAA GCGCTGGTAC TCGACGAAGC CGACGAAATG
TTAAAAATGG GCTTTATCGA CGATATCGAA TGGATTCTGG AACACACCCC AGAGCAGCGC
CAACTGGCAC TGTTCTCGGC CACTATGCCA GAACAAATCA AGCGTGTTGC TAACAAGCAC
TTAAAAGATG CGACTAACAT CAGCATCGCT GCGAGCCACA CCACAGTTGA CTCTATCGAG
CAACGTTTCG TGCAAGTGTC TCAGCACAAC AAGTTAGAAG CCTTAGTACG CGTATTAGAA
GTTGAAAATA CCGAAGGTAT CATCATCTTC GTTCGTACCC GTAACTCATG CGTTGAATTA
GCAGAAAAAC TCGAAGCCCG TGGCTATGCC TCATCACCAC TACACGGTGA TATGAACCAG
CAAGCCCGTG AGCGCGCGGT TGAACAACTG AAAAACGGCA AGCTAGACAT TCTGATCGCG
ACCGACGTTG CGGCCCGTGG TCTGGACGTT GAGCGTATCG GCCACGTAGT TAACTACGAT
ATCCCTTACG ATACTGAAGC TTACGTACAC CGTATCGGTC GTACTGGCCG TGCTGGCCGT
ACGGGTATGG CGATTCTGTT CGTGACCAGC CGTGAAATGC GTATGCTGCG CACCATCGAG
CGCGCAACCA ACAGCCGTAT TTCACCAATG AAAGTGCCAA GCCCAGAGAC AGTTGCAGAG
CGTCGTCTGT CTCGCTTAGG TGAGCAGTTA GCGCAAACCA TGACACAAGA TCTGGACTTT
ATGCGCGAAG CCGTTGCCCA GTTATGTCAA CAACTGGAAG TGGATACCGA TCTGCTGGCC
GCAGCCCTGC TGCACCAAGT TCAGCAAGAA CGCCCACTGC AATTACCTGC GATTCAAGAG
CGTACCCGCG ATGAACGCAA TGAGCGCAGC GAACGTGGTG CTGAACGTGG CGAGCGCGGT
GAACGTCGCA GCCGTGAATC ACGCCCACTG CCAGCCAGCC TTGGCAGCGC CGAAGCGTTA
AAAGACAACC CAGATCTGAA GATGTGCCGT TATGTTATCG ACGTCGGCCG TGACAATGGC
GTGGGTGTGG GCAACATCGT TGGCGCTATT GCAAACGAAG CTAACATCGA CAGCCGTTAC
ATTGGTGCCA TCCAATTATA CGATGCAGTG ACTACCGTTG ACCTGCCAGA CGGCATGCCA
AAAGAAGTGC TGCAGCACCT GAAGAAAGTG CGCGTATGTG GCAAGCCACT GAACATCCGT
GAAGCTGGCG ATCAGGTATT CGTAGATTCA GGCCGTGGCG CACGTAGCGA CCGTCGTCCA
CGTGGTGACC GTCCAATGGG CGAGCGTAAA CCACGTTCAG CCTCTGGCGA CAAGCCGTTT
GCTGATCGCA AACCACGTTC AGATAAGCCA GCAGGCGAGC GTAGACCACG TAAACCACGC
GAAGAGTAA
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| Protein sequence | MSSSERTFRE LGLSENLLRA LDELGYEKPT PIQSASIDPL MAGKDILGQA QTGTGKTGAF
ALPLLNKVTS QAVPQILVLA PTRELAVQVA EAFSSYAKFM KGFHVLPIYG GQSMHQQLNA
LKRGPQVIVG TPGRVMDHMR RGTLKLETLQ ALVLDEADEM LKMGFIDDIE WILEHTPEQR
QLALFSATMP EQIKRVANKH LKDATNISIA ASHTTVDSIE QRFVQVSQHN KLEALVRVLE
VENTEGIIIF VRTRNSCVEL AEKLEARGYA SSPLHGDMNQ QARERAVEQL KNGKLDILIA
TDVAARGLDV ERIGHVVNYD IPYDTEAYVH RIGRTGRAGR TGMAILFVTS REMRMLRTIE
RATNSRISPM KVPSPETVAE RRLSRLGEQL AQTMTQDLDF MREAVAQLCQ QLEVDTDLLA
AALLHQVQQE RPLQLPAIQE RTRDERNERS ERGAERGERG ERRSRESRPL PASLGSAEAL
KDNPDLKMCR YVIDVGRDNG VGVGNIVGAI ANEANIDSRY IGAIQLYDAV TTVDLPDGMP
KEVLQHLKKV RVCGKPLNIR EAGDQVFVDS GRGARSDRRP RGDRPMGERK PRSASGDKPF
ADRKPRSDKP AGERRPRKPR EE
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