Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0520 |
Symbol | |
ID | 4258324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 596274 |
End bp | 597329 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638121134 |
Product | cytochrome c, class I |
Protein accession | YP_736580 |
Protein GI | 114046030 |
COG category | [C] Energy production and conversion |
COG ID | [COG3258] Cytochrome c |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.271919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCTT CTGCCATCTT ACTATTGGCC GCAATGGGCG TGCTAACCGC TCAAGTTCAG GCTGCGAATG AGTTACCCGA TAAACAAGCG CCATTGCCCT CAGTCCCTAA AAATCCTGAT CAAAGTTACT TAACCCCAAG ACCCTTAAGT GCGATTCCCG AAGGTGCCTT CGGCGATAAA GTACGCTTGG GTTATCAGTT ATTTGTGAAT ACCCAGCAGC TGAGAGATAA GTATGTGGGT AACGAGCTTA ACTGTGCCAA CTGCCATATG GATGCGGGCC GTAAGGCGAA TGCGTCACCG CTTTGGGGCG CCTATTTTGC GTATCCCGCG TACCGTAAAA AAGACGATAA AGTAAACACC TTCCAAGAAA GGGTACAAGG CTGTTTTAAC TATTCGATGA ACGGTAAAGC CCCCGCTGCG GGCAGCCCCG AGCTGGTCGC GCTATCGGCC TATGCCTACT GGTTAGGGAT GAGTGGTTTA ATGGATGCGG CTAACCTTGA TGGCCCTGTG CCAGAACTCA GCGATGCCGA ATTGGTAAAA GGCGCCAAAC GTGAGGATTT CCCGCTGCCT GACACGCTAG CCAAAGCCAT GACAGTGGAT CAACGCGCAA ATCTGCCTGG CCGTGGTTAT CCTGAGATCC CAAAACCTGA GTTCGCGTTC TCACCCGAGC GCGGCAAAAC CGTGTATACC GCTCACTGCC AAGCGTGCCA TGGCGCCGAT GGTCAAGGCC AAGCGATTGC GGGTGTTTAC TCTCTGCCGC CATTATGGGG TCCTAAGAGC TACAACTGGG GCGCAGGCAT GCACAGGGTC AATACGGCCG CATTCTTCAT TTATGAAAAC ATGCCCTTCG CTAAGAGTAT TCAGCTGACT AACCAACAGG CTTGGGACGT TGCGGCTTAC ATTAACTCCC ATGAACGGCC ACAGGACCCC CGCAATAAGG GCGATGTGAA ACAAGCTCAG GAGAAATACC ATAACGACAA TGACTACTAC GGTGTCGAAG TCGATGGCAA AGTGCTTGGC ACCGCCTCTT ATCCGGTGTT TCCGAAAAAA TCTTAG
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Protein sequence | MKSSAILLLA AMGVLTAQVQ AANELPDKQA PLPSVPKNPD QSYLTPRPLS AIPEGAFGDK VRLGYQLFVN TQQLRDKYVG NELNCANCHM DAGRKANASP LWGAYFAYPA YRKKDDKVNT FQERVQGCFN YSMNGKAPAA GSPELVALSA YAYWLGMSGL MDAANLDGPV PELSDAELVK GAKREDFPLP DTLAKAMTVD QRANLPGRGY PEIPKPEFAF SPERGKTVYT AHCQACHGAD GQGQAIAGVY SLPPLWGPKS YNWGAGMHRV NTAAFFIYEN MPFAKSIQLT NQQAWDVAAY INSHERPQDP RNKGDVKQAQ EKYHNDNDYY GVEVDGKVLG TASYPVFPKK S
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