Gene Shewmr7_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0516 
Symbol 
ID4258320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp592858 
End bp593334 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content51% 
IMG OID638121130 
ProductMarR family transcriptional regulator 
Protein accessionYP_736576 
Protein GI114046026 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.716514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAGA AAGAATTAGA GCGATTAAAG GAGTTATCCC TGGCGGAACA TTTAGGCCGC 
TTGCACCGAC TATGGCGCAC CGTGGCGGAT GTGGAATTAG CGCCACTCGG GTTAACTCAT
CCTCGTTGGA CGGCATTGTG GAAGTTATTG CGTTTGGGCG ACAACGTGAG CCAGAAGGTG
TTGGCGGATG CGCTGGAAAT TGAATTGGCT TCTTTGATGC GCACGTTAGG GCAGCTTGAG
GAGCAAGGTT TAGTCGAGCG TTACTGCTGC ACTAAAGATA AGCGCGCCCG AATCGTGTCG
TTAACACCCG CGGGAAAGGA TGTATTAAAG CAAGTCGAAG CGCGGATTAT TCAAGTGCGC
GCAGAGTTGT TGGCTGGGAT CAGCGCCAGC GAGCTTAGCG AATTTGAACG CATCATTAGC
CTAATCAGTG ATAACGCCTT AGCCAAATTG GCTAAGTGCA CAGAAATTCT TGAGTGA
 
Protein sequence
MMQKELERLK ELSLAEHLGR LHRLWRTVAD VELAPLGLTH PRWTALWKLL RLGDNVSQKV 
LADALEIELA SLMRTLGQLE EQGLVERYCC TKDKRARIVS LTPAGKDVLK QVEARIIQVR
AELLAGISAS ELSEFERIIS LISDNALAKL AKCTEILE