| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0514 |
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| Symbol | metF |
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| ID | 4258318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 591597 |
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| End bp | 592490 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638121128 |
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| Product | 5,10-methylenetetrahydrofolate reductase |
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| Protein accession | YP_736574 |
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| Protein GI | 114046024 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
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| TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTTTTC ATCACGCACA ACATTCACAT TCGCTAAACC AAAGTTTGTC TGAACTTAAT
GGCGATATTA ATGTTTCTTT TGAGTTTTTC CCGCCATCAA CCCCCGAAAT GGAACAGATC
CTGTGGAACT CTATCCGCCG TTTAGAGCCG CTGAATCCTA AGTTTGTTTC AGTGACCTAT
GGTGCCAACT CGGGCGTGCG TGACCGTACC CACGGCGTGA TTGAACGTAT TCAAAAAGAA
ACCAATCTGG TTGCCGCGCC GCATTTAACC TTAGTGGATG CCAGCGACGA AGAATTGTTA
GATCTGGCGA AGCATTACTG GAAATCGGGG ATCCGCGACA TAGTGGCACT GCGTGGCGAC
TTGCCTGCGG GTAGCCCGAA ACCGACTCGC TTTGCGGCGG ATTTAGTGCG CTTACTGCGC
TCTGTGGCCG ACTTTGATAT TTCGGTTGCC GCTTACCCAG AAGTACACCC AGATGCGGCT
AACGCTCAAG CCGATTTGAT TAACCTCAAG CGTAAAATCG ATGCCGGTGC GAGCCGTGCT
ATTACCCAGT TTTTCTTCGA TGTTGAATCT TACCTACGTT TTCGCGACCG CTGCGTTGCG
GCGGGAATTG ATGTCGAAAT CGTCCCCGGC ATTTTGCCTG TGACCAACTT CACTCAGTTA
AAACGCTTCG CGGGCATGAC CAATGTGAGC CTGCCGAGCT GGTTGCATAA GCAGTTCGAT
GGCCTAGAGA ATGATGCGGG CACGCGTCAG CTGGTGGGCG CTAACGTGGC GATCGATATG
GTCAAAGTGC TATCCCGTGA AGGTGTTAAA GATTTCCACT TCTACACCCT CAACCGCGCC
GAGCTGACCT ATGCGATTTG CCATACCTTA GGGGTTCGCC CAAAGGCGGT ATAA
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| Protein sequence | MAFHHAQHSH SLNQSLSELN GDINVSFEFF PPSTPEMEQI LWNSIRRLEP LNPKFVSVTY
GANSGVRDRT HGVIERIQKE TNLVAAPHLT LVDASDEELL DLAKHYWKSG IRDIVALRGD
LPAGSPKPTR FAADLVRLLR SVADFDISVA AYPEVHPDAA NAQADLINLK RKIDAGASRA
ITQFFFDVES YLRFRDRCVA AGIDVEIVPG ILPVTNFTQL KRFAGMTNVS LPSWLHKQFD
GLENDAGTRQ LVGANVAIDM VKVLSREGVK DFHFYTLNRA ELTYAICHTL GVRPKAV
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