| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0488 |
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| Symbol | |
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| ID | 4255615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 558278 |
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| End bp | 559252 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 638121102 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_736548 |
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| Protein GI | 114045998 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCTA ACAGAATCCT TGCCCTAACG GCGTTGGTCG CATTAGGCCT TATCTTAGCC
TATGGGCTCA AACTGGCTTA CAGCCCAGCG CCGAGCCTGT TACAGGGGCA AATCGAAGCC
CGTGAATATA ACGTATCCTC TAAGGTGCCA GGGCGTGTCG AGCAGGTCCT TGTGCGCCGT
GGCGATAGCG TCAGCGAAGG CGATTTGTTA TTTGCCATTC ATAGTCCAGA GCTCGATGCC
AAGTTGATGC AGGCCGAAGG CGGTCGAGAT GCGGCCAAAG CCCTACAACA GGAGGCGAAT
AACGGCGCCC GTACCCAAGA GGTGATGGCG GCTAAAGAGC AATGGCTCAA GGCGCAAGCG
GCGGCAACGC TGGCGAAAAC TACCTATACC CGAGTGGAAA ATCTCTTCAA CGAAGGGGTT
GCCGCAAGAC AAAAACGCGA TGAAGCCTTT ACTCAGTGGC AAGCGGCCAA GTACACAGAG
CAGGCCGCAT TAGCCATGTA TCAAATGGCC GAAGAAGGTG CGCGGGTCGA AACCAAAGCT
GCGGCGGCGG GTAATGCTCG TATGGCCGAG GGCGCGGTGA AAGAAGTCAG TGCCATCATG
GCTGATAGCC AAATGCGTGC GCCTAAGTCT GGGGAAATCA GCGAAGTATT GTTGCAAGCG
GGAGAGTTAG CACCGAGCGG CTTCCCTGTG GTCAGCCTTA TCGACATGCA GGACGCTTGG
GCAGTATTCC AAGTGCGTGA AGATCAACTC AAACGCTTTA AAAAGGGCGA TAAACTGCCA
TTAACCATTC CTGCGCTGGA TAAAACCGTG GAGTTCACCG TCGCCCATAT TAGTGTGATG
GGCGACTTTG CGACTTGGCG TTCAACCGAA AGTGGCCACG ATTTCGATAT GCGCACCTTC
GAGGTGGAGC TGCGCCCAAC TGCGCCGATC CCCGATCTGC GTGTCGGTAT GTCTGTGCTG
CTCAGTGCTG AGTAA
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| Protein sequence | MRANRILALT ALVALGLILA YGLKLAYSPA PSLLQGQIEA REYNVSSKVP GRVEQVLVRR
GDSVSEGDLL FAIHSPELDA KLMQAEGGRD AAKALQQEAN NGARTQEVMA AKEQWLKAQA
AATLAKTTYT RVENLFNEGV AARQKRDEAF TQWQAAKYTE QAALAMYQMA EEGARVETKA
AAAGNARMAE GAVKEVSAIM ADSQMRAPKS GEISEVLLQA GELAPSGFPV VSLIDMQDAW
AVFQVREDQL KRFKKGDKLP LTIPALDKTV EFTVAHISVM GDFATWRSTE SGHDFDMRTF
EVELRPTAPI PDLRVGMSVL LSAE
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