| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0473 |
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| Symbol | |
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| ID | 4256689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 538010 |
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| End bp | 538534 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638121087 |
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| Product | methylation site containing protein |
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| Protein accession | YP_736533 |
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| Protein GI | 114045983 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000513166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAC AACAAGGTTT TACCTTAATC GAATTAGTCG TTGTGATCAT CATCTTAGGT
ATTCTTGCTG TCACAGCGGC ACCTAAGTTT ATTAATTTGC AGTCAGATGC TCGTGCATCT
GCAATTCAAG GAATGAAAGG GGCAATTCAA GGTGCGAATA GCCTAGTTTA TTCAAAAGCG
GCGTTAGCAG GAAAAGAGAA AGAAGCAACT TATAAATTAG ATATTGCAGG TACGAGTTCA
GACGATGACG ATGATGTTGA TATTGTTTAT GGCTATATGG CTGCGACTCA AGATGCTTTA
GAAGCAGGTA TGGATGTTAA ATTTGATGTC GGTACTTCAC CAACTGATAC TGGTTCAAAT
GATTGGGTAA TTAATGCCTC CGGTAACTCT GCCACCATTT GGCAACGTGG CGCTCCTGCT
GATGTAACTA CAACTGGTTC TGAAGCAAGC TGTAAGATTG TTTACACTGC AGCAGCTAGC
GCAGGCGCTT TACCAACGAT TACCCTTACA GATAATGGTT GTTAA
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| Protein sequence | MKRQQGFTLI ELVVVIIILG ILAVTAAPKF INLQSDARAS AIQGMKGAIQ GANSLVYSKA
ALAGKEKEAT YKLDIAGTSS DDDDDVDIVY GYMAATQDAL EAGMDVKFDV GTSPTDTGSN
DWVINASGNS ATIWQRGAPA DVTTTGSEAS CKIVYTAAAS AGALPTITLT DNGC
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