Gene Shewmr7_0458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0458 
Symbol 
ID4256586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp521680 
End bp522834 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content50% 
IMG OID638121072 
Producthypothetical protein 
Protein accessionYP_736518 
Protein GI114045968 
COG category 
COG ID 
TIGRFAM ID[TIGR03505] FimV N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAA TAGCGAAATC ATTAGGACTA TTCGCCTTAG TGTGTAGCGC TTGTGTGCAG 
GCGCAAGTTT CCCATGTGAG TATCAATAGC CGCATGTTTG ATTTGGGCGC TTACCCCAAA
ATGCGCGTCA ATGTGATCAC TGATAATCAG GATATGACTC GGCTCGAATT TGCGGTGCAG
CAGTCTGGTG GTGAAGAAAA ACTCATGGCC GAGCAGCTTA ACCGTTTCTT GGTTTTGCTG
ACGGGGGTGG AAGATGTAAC GGATCCTAAA GCTCGGCTGT TAGTACGCGA ATACCGTGTC
GATCGTTGGT ATGAAGTGAA AAACCTGCCG CTGTTTGATA ACGCTTCCTC TGCGGCGTCT
TCAGTATCGC AAGCAAAAAC GGCGGTTGTG AAATCGAGTA AAGCGGCCAC AGCCGAGACC
CGTCAGCTGG CGGCAAGCTC TGCTAAAAGT GACAAAACCC CAGTTAAATC AACTAAGGTT
GTGCAAGAGG TGAATTTAGT CACCGCTGAA GCAGATGTTG CGCCCGTTGC TTCCGTTGTT
GTGGCTGCGG TGACGACAGA AGTTGCCGCT GCACCTCGCG CCTCTGGATT TACCTTCCCT
GAGGATAAGT CTGATGCGAA AGCATCCTCC AGCTCGAGTT CGTCGGTAGT GGCATCTGCT
AAAGCTGAAG TGGCTAAATC TGAGCCATCT AAAACTGAAG CAGCTAAAGC TGAGATGTCT
ACACCTGAAC CGTCGACAAC AGAAGTCGCG AGTGAGCCGG CGGTTGCACA AGCGTCTGCT
GATCTGCCAA GAGTGGATAA AAGCAAAGCT GCGATTGATG CGCCCGAAGT TAAGGCTGGC
GAAGCAACTG CAACTGAGGT TAATACGGTA AGTTCGACAA ATTCTCAGTC AACAAATTCG
GGTGAGTGTC TGTTGGATTA TCACAACGAG ACGTTATGGC GCATTGCCAA TCGCTATGCC
CCTGAATGGA AAGTAAGTGT CTATGGCGCC ATGCTGGCGA TCCACGATGC TAACCCTAAG
GCATTTTCGA AGAATCGAAT TAACGCGCTG AAGAAAGATG CCACGCTTTA TTGTCCATCG
GCTGAGATAC TTGCCCGTTA TCCCGAAGCG CAGGCGGCTA AGACAAGTTT CGAAGATAGA
GAGGCGGGCA GATAA
 
Protein sequence
MTKIAKSLGL FALVCSACVQ AQVSHVSINS RMFDLGAYPK MRVNVITDNQ DMTRLEFAVQ 
QSGGEEKLMA EQLNRFLVLL TGVEDVTDPK ARLLVREYRV DRWYEVKNLP LFDNASSAAS
SVSQAKTAVV KSSKAATAET RQLAASSAKS DKTPVKSTKV VQEVNLVTAE ADVAPVASVV
VAAVTTEVAA APRASGFTFP EDKSDAKASS SSSSSVVASA KAEVAKSEPS KTEAAKAEMS
TPEPSTTEVA SEPAVAQASA DLPRVDKSKA AIDAPEVKAG EATATEVNTV SSTNSQSTNS
GECLLDYHNE TLWRIANRYA PEWKVSVYGA MLAIHDANPK AFSKNRINAL KKDATLYCPS
AEILARYPEA QAAKTSFEDR EAGR