Gene Shewmr7_0449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0449 
Symbol 
ID4256577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp511697 
End bp512167 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content48% 
IMG OID638121063 
Producthypothetical protein 
Protein accessionYP_736509 
Protein GI114045959 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00108597 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTTT CGAATCTGAT TTTAGTTTGG TCTATTATCG GGATTATCTT GATGTTAGCC 
GAGCTGGTGA TACCTGGAGG TATTGTCGTG CTACTCGGTG CCGCCTGCTT AGTGGTGGCT
GGCGCCTTAT GGATTGGCCT GGTGGAAGGT GTGGTTCAAA GCCTGACACT GTGGTTTATT
TCCGCCATCG TCTTATTACT CGCCTTTCGG CAAGTCACTC AAAAATTGGT TGGTGGAGAT
TCCCATGTGG ATAACACCGA TGAAGAACTT GATATCTACA ATCAAATCGC CCGTGTTAAA
CAAACCATAG GTCCAGGACA AACGACAGGA AGAGTCGAGT TCCAAGGGAG CGAATGGCCC
GCATTGGGGG ATGGTAGTAT CATTGCTGCG GGCACTGAGG TCAGGATTAT CTGCCGTGAA
AACATTGCCC TAGTGGTTGA GCCTGTTGAG CAGGCAACGT CTCAAAACTA A
 
Protein sequence
MEFSNLILVW SIIGIILMLA ELVIPGGIVV LLGAACLVVA GALWIGLVEG VVQSLTLWFI 
SAIVLLLAFR QVTQKLVGGD SHVDNTDEEL DIYNQIARVK QTIGPGQTTG RVEFQGSEWP
ALGDGSIIAA GTEVRIICRE NIALVVEPVE QATSQN