Gene Shewmr7_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0338 
Symbol 
ID4257042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp373531 
End bp375486 
Gene Length1956 bp 
Protein Length651 aa 
Translation table11 
GC content43% 
IMG OID638120944 
Producthypothetical protein 
Protein accessionYP_736399 
Protein GI114045849 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000473528 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.110861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAC GAGCATTTTA TTCGGCGAGT TTTAAAGATT TTCTATCAGC AGAGCCCGAT 
GTGATTACCG GGCAGATATC ACGTTTCCAT ACTCAGCATT TATTGCATTC ACAAACTCGC
GCTTGGGTGA CTGAAATTGA AGTTCTTAAA CGCTCCTTGG CCGAGAGTAT TGAGCGAGAA
GGGCATATTT TCATTGAGTT TATGATCCCA CGAATGGGAC GACGTGCCGA TGTCGTGATT
ATATTTAAAG GGATTGTTTT TGTTGTAGAG TTTAAAGTTG GCGCAAAAGT ATTTACCGCT
GCAGATATGA GGCAAACTCA TGGATATGCC TTAGATTTAA AGAACTTTCA TCGCGGTAGT
CATGATAAAT ATCTAGTTCC TCTGCTTGTC GCCACCAAAG CGATGAGCCA ATCGAGAAAT
CCAGAATTCG CCGACGATAA TGTTGCTTCG ACCTTGTGTA TTTCACCCAG TGAATTGTTT
TCAAGAATGC GCCAAATCGC TGAACGGTTG AATCAAGCTC CTTTTGATCC AAACTTGTGG
GCTGATTCAG GTTATTTACC GACACCAACC ATTATCGAAG CGGCGCAAGC GCTATATGCG
CAGCATAAAG TCGAAGATAT AGCTCGTAGT GAAGCCGACA CTCAAAATCT TGGACAAACG
AGTCAGCAAT TACTTCAGTT GATTCACGAT GCTCGGATCA ATAAGCGAAA AATAATTTGT
TTCGTTACCG GTGTTCCGGG GGCGGGTAAA ACCCTTGTAG GGCTTAATAT TGCGAGTATT
CACGCAAACA GGGAAGAGAA TGAGTATTCT GTTTTCCTCA GTGGTAATGG CCCCTTGGTG
GCGGTATTAC AGGAAGCCTT AGCTAGGGAT AGATCTTCTA GAACTGGTGA TTCAATCAGA
GCAACTAGAA AGGAGACTGA ATCATTTATT CAAAATATCC ATCGTTTTAG AGATGAATAC
CTGCATGGTG GCGTGCCGCC TGAAAAAGTG GCCATATTTG ATGAGGCTCA ACGGGCGTGG
GATAAAGAGC AGGCAAGCGA TTTTATGCGT CGTAAGCGAG GTATTGTCGA CTTTGATAAA
TCAGAGCCTG AATTTCTCAT CGAAGTAATG GACCGTCGTC AAGACTGGGC GTTTATTATT
GCGCTAGTTG GTGGTGGACA GGAGATTAAT AAAGGTGAGG CAGGACTAGC TGGTTGGTTG
GATGCGCTTA AGGCCAAGTT CTTAGATTGG GATGTCTATT TTTCCACAGC TTTATTGTCC
GGTGAGTATG TTTCGCTAGG GGTAGATCTG AATGCGGTTT CAAGGGCGAA TGTCTTACCT
AACTTACATC TTGCCACATC CATGCGATCT TTCCGTGCTG AAAAGTTGTC CAGTTTTATT
CATTACTTGG TTGCTGGGCA ATGCGGGCTT GCTGTTAGCA TTTATAAAGA TCTAGAGCAT
GTCTATCCTA TCAAAGTCAC TCGGGATATA GCTAAAGCCA AAGCTTGGGT TAATCTTCAC
AAACGAGCCA ATGAGTCTAT GGGGCTGCTT GCTTCTTCTA ACGGCATTAG GCTTAAAGCT
GAGGGTATTT TCGTTAAGAA CGAGATAGAC CCTGCTAAGT GGTTTTTAAG TGGTGCTGAA
GATATTCGTT CTGCCGAATT TTTAGAGGAT GTTGCTACTG AATTTGATGT ACAAGGGCTA
GAGCTAGACT GGTGCGTTGT GGCTTGGGAT GCAGATTACC GTTTCAATGC TCAAGCATTT
GAGCACTGGC AGTTTGTAGG AACCAAATGG CAAAAACGAA GCCAATTAGT TCGGCAAAAA
TATCTTGAAA ATGCTTATCG CGTATTGTTG ACACGGGCTC GTCAGGGCAT GGTGATATTC
GTTCCTAAAG GCGATAAATC AGATGAGACT CGAGATCCCA ATTTTTATGA TCATACTTAT
AAGTATTTGA TAGATTGCGG GATTGGTGTG GTTTAG
 
Protein sequence
MTQRAFYSAS FKDFLSAEPD VITGQISRFH TQHLLHSQTR AWVTEIEVLK RSLAESIERE 
GHIFIEFMIP RMGRRADVVI IFKGIVFVVE FKVGAKVFTA ADMRQTHGYA LDLKNFHRGS
HDKYLVPLLV ATKAMSQSRN PEFADDNVAS TLCISPSELF SRMRQIAERL NQAPFDPNLW
ADSGYLPTPT IIEAAQALYA QHKVEDIARS EADTQNLGQT SQQLLQLIHD ARINKRKIIC
FVTGVPGAGK TLVGLNIASI HANREENEYS VFLSGNGPLV AVLQEALARD RSSRTGDSIR
ATRKETESFI QNIHRFRDEY LHGGVPPEKV AIFDEAQRAW DKEQASDFMR RKRGIVDFDK
SEPEFLIEVM DRRQDWAFII ALVGGGQEIN KGEAGLAGWL DALKAKFLDW DVYFSTALLS
GEYVSLGVDL NAVSRANVLP NLHLATSMRS FRAEKLSSFI HYLVAGQCGL AVSIYKDLEH
VYPIKVTRDI AKAKAWVNLH KRANESMGLL ASSNGIRLKA EGIFVKNEID PAKWFLSGAE
DIRSAEFLED VATEFDVQGL ELDWCVVAWD ADYRFNAQAF EHWQFVGTKW QKRSQLVRQK
YLENAYRVLL TRARQGMVIF VPKGDKSDET RDPNFYDHTY KYLIDCGIGV V