Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0338 |
Symbol | |
ID | 4257042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 373531 |
End bp | 375486 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638120944 |
Product | hypothetical protein |
Protein accession | YP_736399 |
Protein GI | 114045849 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000473528 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.110861 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAAC GAGCATTTTA TTCGGCGAGT TTTAAAGATT TTCTATCAGC AGAGCCCGAT GTGATTACCG GGCAGATATC ACGTTTCCAT ACTCAGCATT TATTGCATTC ACAAACTCGC GCTTGGGTGA CTGAAATTGA AGTTCTTAAA CGCTCCTTGG CCGAGAGTAT TGAGCGAGAA GGGCATATTT TCATTGAGTT TATGATCCCA CGAATGGGAC GACGTGCCGA TGTCGTGATT ATATTTAAAG GGATTGTTTT TGTTGTAGAG TTTAAAGTTG GCGCAAAAGT ATTTACCGCT GCAGATATGA GGCAAACTCA TGGATATGCC TTAGATTTAA AGAACTTTCA TCGCGGTAGT CATGATAAAT ATCTAGTTCC TCTGCTTGTC GCCACCAAAG CGATGAGCCA ATCGAGAAAT CCAGAATTCG CCGACGATAA TGTTGCTTCG ACCTTGTGTA TTTCACCCAG TGAATTGTTT TCAAGAATGC GCCAAATCGC TGAACGGTTG AATCAAGCTC CTTTTGATCC AAACTTGTGG GCTGATTCAG GTTATTTACC GACACCAACC ATTATCGAAG CGGCGCAAGC GCTATATGCG CAGCATAAAG TCGAAGATAT AGCTCGTAGT GAAGCCGACA CTCAAAATCT TGGACAAACG AGTCAGCAAT TACTTCAGTT GATTCACGAT GCTCGGATCA ATAAGCGAAA AATAATTTGT TTCGTTACCG GTGTTCCGGG GGCGGGTAAA ACCCTTGTAG GGCTTAATAT TGCGAGTATT CACGCAAACA GGGAAGAGAA TGAGTATTCT GTTTTCCTCA GTGGTAATGG CCCCTTGGTG GCGGTATTAC AGGAAGCCTT AGCTAGGGAT AGATCTTCTA GAACTGGTGA TTCAATCAGA GCAACTAGAA AGGAGACTGA ATCATTTATT CAAAATATCC ATCGTTTTAG AGATGAATAC CTGCATGGTG GCGTGCCGCC TGAAAAAGTG GCCATATTTG ATGAGGCTCA ACGGGCGTGG GATAAAGAGC AGGCAAGCGA TTTTATGCGT CGTAAGCGAG GTATTGTCGA CTTTGATAAA TCAGAGCCTG AATTTCTCAT CGAAGTAATG GACCGTCGTC AAGACTGGGC GTTTATTATT GCGCTAGTTG GTGGTGGACA GGAGATTAAT AAAGGTGAGG CAGGACTAGC TGGTTGGTTG GATGCGCTTA AGGCCAAGTT CTTAGATTGG GATGTCTATT TTTCCACAGC TTTATTGTCC GGTGAGTATG TTTCGCTAGG GGTAGATCTG AATGCGGTTT CAAGGGCGAA TGTCTTACCT AACTTACATC TTGCCACATC CATGCGATCT TTCCGTGCTG AAAAGTTGTC CAGTTTTATT CATTACTTGG TTGCTGGGCA ATGCGGGCTT GCTGTTAGCA TTTATAAAGA TCTAGAGCAT GTCTATCCTA TCAAAGTCAC TCGGGATATA GCTAAAGCCA AAGCTTGGGT TAATCTTCAC AAACGAGCCA ATGAGTCTAT GGGGCTGCTT GCTTCTTCTA ACGGCATTAG GCTTAAAGCT GAGGGTATTT TCGTTAAGAA CGAGATAGAC CCTGCTAAGT GGTTTTTAAG TGGTGCTGAA GATATTCGTT CTGCCGAATT TTTAGAGGAT GTTGCTACTG AATTTGATGT ACAAGGGCTA GAGCTAGACT GGTGCGTTGT GGCTTGGGAT GCAGATTACC GTTTCAATGC TCAAGCATTT GAGCACTGGC AGTTTGTAGG AACCAAATGG CAAAAACGAA GCCAATTAGT TCGGCAAAAA TATCTTGAAA ATGCTTATCG CGTATTGTTG ACACGGGCTC GTCAGGGCAT GGTGATATTC GTTCCTAAAG GCGATAAATC AGATGAGACT CGAGATCCCA ATTTTTATGA TCATACTTAT AAGTATTTGA TAGATTGCGG GATTGGTGTG GTTTAG
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Protein sequence | MTQRAFYSAS FKDFLSAEPD VITGQISRFH TQHLLHSQTR AWVTEIEVLK RSLAESIERE GHIFIEFMIP RMGRRADVVI IFKGIVFVVE FKVGAKVFTA ADMRQTHGYA LDLKNFHRGS HDKYLVPLLV ATKAMSQSRN PEFADDNVAS TLCISPSELF SRMRQIAERL NQAPFDPNLW ADSGYLPTPT IIEAAQALYA QHKVEDIARS EADTQNLGQT SQQLLQLIHD ARINKRKIIC FVTGVPGAGK TLVGLNIASI HANREENEYS VFLSGNGPLV AVLQEALARD RSSRTGDSIR ATRKETESFI QNIHRFRDEY LHGGVPPEKV AIFDEAQRAW DKEQASDFMR RKRGIVDFDK SEPEFLIEVM DRRQDWAFII ALVGGGQEIN KGEAGLAGWL DALKAKFLDW DVYFSTALLS GEYVSLGVDL NAVSRANVLP NLHLATSMRS FRAEKLSSFI HYLVAGQCGL AVSIYKDLEH VYPIKVTRDI AKAKAWVNLH KRANESMGLL ASSNGIRLKA EGIFVKNEID PAKWFLSGAE DIRSAEFLED VATEFDVQGL ELDWCVVAWD ADYRFNAQAF EHWQFVGTKW QKRSQLVRQK YLENAYRVLL TRARQGMVIF VPKGDKSDET RDPNFYDHTY KYLIDCGIGV V
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