Gene Shewmr7_0336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0336 
Symbol 
ID4257040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp372028 
End bp373143 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content48% 
IMG OID638120942 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_736397 
Protein GI114045847 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.134655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.368234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGATTT GGCAGCAAGC CGATTGGCCT AAGTTTCATT GGAATGCCAG CAGCATTGAT 
GCCTTGCTGC GTCAGGTCTA TTTCAATCAG GGCCAACTGC TTGGCAAGCA AATGCTAAGT
CACGACGACA GCCAGTTAAC CTCAGCGGCG GCACTCGACA CCTTACTCGC TAACATTATC
CATTCCAGTG CCATCGAAGG TGAAAAGCTC AATGCGGCTT CGGTGCGCTC ATCCTTGGCT
AAAAAACTCG GTGTGTCCGA AGACAAACCG TATCCGACCA CGGCACAAAC CGATGGTTTG
GCTGACATTA TGCTCGATGC CTTAAAAAAT TTAGATACAG AGTTAACCCT TGAGCGGATA
TTAGGTTGGC ATAAACAGTT ATTTCCCCGG GGTTATACGC TGTTTAACCC CGTTATTGGT
GGAGCGCTAC GTGGCGATAC GCCTATGCAA GTTGTCTCAG GCCGGATTGA TAAACCAACG
GTGCATTTTG AGGCCCTCTC TCGAGCGACT TTGGACGCTG AACTCTCGCA GTTTATCGAA
TGGTTTAATG CATCAAGGCA AGATCTGGGT TTAGATCCGC TGATCCGTGC GGCGATAACT
CACCTTTGGT TTGTGACTCT GCATCCGCTT GATGATGGTA ATGGGCGCAT CACGCGTTTA
TTGACCGATT TAGCTTTGGC GCAAGCGGAA AAACGCTCAA TTCGTTTTTA CGCTATGTCG
GTCAGTATTC TGGCCCGTCG CCAAGCCTAC TATGACATTT TAGAGTCCAC CCAAAGGGGA
AATGTCGATA TTACTCCTTG GTTAGTATGG TTTTTTGAAA CCCTCAATGA TTGCTTACTC
AATGCGATGG CAGATGTGAA CAAGACTCTG CTAAAAACGC AGTATTGGCA AAATGTCGAT
CAATCCTTAT TGAGTCAAGA GCAAGCCAAA GTGCTCAATC GGATGTTAGA TGGCGATTTT
GAATTAGGGA TGAATAGTAG CCAGTATCAA AAGGTCGCTA AGGTGAGCCG CGCCACCGCC
ACCCGTCACC TTGCGCAAAT GGTCGAGCAA GGCTTTTTAG TGAAAGCCGA CGCCGGCGGC
CGAAGTACAA GGTACTTATT GCCGAATGGG CAGTAG
 
Protein sequence
MWIWQQADWP KFHWNASSID ALLRQVYFNQ GQLLGKQMLS HDDSQLTSAA ALDTLLANII 
HSSAIEGEKL NAASVRSSLA KKLGVSEDKP YPTTAQTDGL ADIMLDALKN LDTELTLERI
LGWHKQLFPR GYTLFNPVIG GALRGDTPMQ VVSGRIDKPT VHFEALSRAT LDAELSQFIE
WFNASRQDLG LDPLIRAAIT HLWFVTLHPL DDGNGRITRL LTDLALAQAE KRSIRFYAMS
VSILARRQAY YDILESTQRG NVDITPWLVW FFETLNDCLL NAMADVNKTL LKTQYWQNVD
QSLLSQEQAK VLNRMLDGDF ELGMNSSQYQ KVAKVSRATA TRHLAQMVEQ GFLVKADAGG
RSTRYLLPNG Q